RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TWISTNBQ3B726 338 aaPredicted RBP7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 ESCO1Q5FWF5 840 aa7.69□□□□□ -1.18
TNFSF4-201ENST00000281834 SHPRHQ149N8 1683 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 SEC24BO95487 1268 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 C8orf34Q49A92 452 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 ADAMTS13Q76LX8 1427 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 IQSEC2Q5JU85 1478 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 LNPKQ9C0E8 428 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 MAP3K19Q56UN5 1328 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 IPO8O15397 1037 aaKnown RBP7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 GNAI1P63096 354 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 SPRYD3Q8NCJ5 442 aa7.68□□□□□ -1.18
TNFSF4-201ENST00000281834 RTF1Q92541 710 aaKnown RBP7.67□□□□□ -1.18
TNFSF4-201ENST00000281834 PTPRUQ92729 1446 aa7.67□□□□□ -1.18
TNFSF4-201ENST00000281834 SLC4A10Q6U841 1118 aa7.67□□□□□ -1.18
TNFSF4-201ENST00000281834 DDX19BQ9UMR2 479 aa7.67□□□□□ -1.18
TNFSF4-201ENST00000281834 TBX22Q9Y458 520 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 ATP7BP35670 1465 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 CPSF1Q10570 1443 aaKnown RBP7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 PNPLA6Q8IY17 1366 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 ANKLE2Q86XL3 938 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 PLEKHG1Q9ULL1 1385 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 KIF16BQ96L93 1317 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 VAMP4O75379 141 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 PSME1Q06323 249 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 LRRC7Q96NW7 1537 aa7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 COL3A1P02461 1466 aaPredicted RBP7.66□□□□□ -1.18
TNFSF4-201ENST00000281834 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
TNFSF4-201ENST00000281834 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
TNFSF4-201ENST00000281834 LMOD3Q0VAK6 560 aa7.65□□□□□ -1.18
TNFSF4-201ENST00000281834 ANKRD45Q5TZF3 282 aa7.65□□□□□ -1.18
TNFSF4-201ENST00000281834 ZNF428Q96B54 188 aa7.65□□□□□ -1.18
TNFSF4-201ENST00000281834 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.19
TNFSF4-201ENST00000281834 EYA1Q99502 592 aa7.65□□□□□ -1.19
TNFSF4-201ENST00000281834 SLKQ9H2G2 1235 aaPredicted RBP7.65□□□□□ -1.19
TNFSF4-201ENST00000281834 TSPYL4Q9UJ04 414 aa7.65□□□□□ -1.19
TNFSF4-201ENST00000281834 MTHFSDQ2M296 383 aaKnown RBP7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 CFAP44Q96MT7 982 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 IFT57Q9NWB7 429 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 FAM135BQ49AJ0 1406 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 UPF2Q9HAU5 1272 aaKnown RBP7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 IL16Q14005 1332 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 REREQ9P2R6 1566 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 F6X3S4 739 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 ORAI2Q96SN7 254 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 PHF8Q9UPP1 1060 aa7.64□□□□□ -1.19
TNFSF4-201ENST00000281834 USP6P35125 1406 aa7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 NRXN3Q9Y4C0 1643 aa7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 CT47B1P0C2W7 299 aaPredicted RBP7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 SIRT1Q96EB6 747 aa7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 MAP2P11137 1827 aaKnown RBP7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 SLC4A2P04920 1241 aa7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 MRPL50Q8N5N7 158 aaKnown RBP7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 DLC1Q96QB1 1528 aa7.63□□□□□ -1.19
TNFSF4-201ENST00000281834 DDX17Q92841 729 aaKnown RBP7.62□□□□□ -1.19
TNFSF4-201ENST00000281834 USP32Q8NFA0 1604 aa7.62□□□□□ -1.19
TNFSF4-201ENST00000281834 LRRC59Q96AG4 307 aaKnown RBP7.62□□□□□ -1.19
TNFSF4-201ENST00000281834 ZBTB40Q9NUA8 1239 aa7.62□□□□□ -1.19
TNFSF4-201ENST00000281834 MED14O60244 1454 aa7.62□□□□□ -1.19
TNFSF4-201ENST00000281834 EIF2S2P20042 333 aaKnown RBP7.62□□□□□ -1.19
TNFSF4-201ENST00000281834 ALDH1L2Q3SY69 923 aa7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 PROSER2Q86WR7 435 aaPredicted RBP7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 AATKQ6ZMQ8 1374 aa7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 DEKP35659 375 aaKnown RBP7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 ZC3H6P61129 1189 aaKnown RBP7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 TECPR2O15040 1411 aa7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 SETD1BQ9UPS6 1966 aaKnown RBP7.61□□□□□ -1.19
TNFSF4-201ENST00000281834 HOXC9P31274 260 aa7.6□□□□□ -1.19
TNFSF4-201ENST00000281834 HSPA2P54652 639 aa7.6□□□□□ -1.19
TNFSF4-201ENST00000281834 G2E3Q7L622 706 aa7.6□□□□□ -1.19
TNFSF4-201ENST00000281834 UBR1Q8IWV7 1749 aa7.6□□□□□ -1.19
TNFSF4-201ENST00000281834 CDC42BPGQ6DT37 1551 aa7.6□□□□□ -1.19
TNFSF4-201ENST00000281834 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
TNFSF4-201ENST00000281834 ZBTB7BO15156 539 aaPredicted RBP7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 ZNF853P0CG23 659 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 FKBP5Q13451 457 aaPredicted RBP7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 FLT4P35916 1363 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 ANXA1P04083 346 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 ARXQ96QS3 562 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 API5Q9BZZ5 524 aaKnown RBP7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 TTC21AQ8NDW8 1320 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 SMARCA5O60264 1052 aaPredicted RBP7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 MEIS3Q99687 375 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 STK31Q9BXU1 1019 aa7.59□□□□□ -1.19
TNFSF4-201ENST00000281834 ADGRB2O60241 1585 aa7.59□□□□□ -1.2
TNFSF4-201ENST00000281834 KIF20BQ96Q89 1820 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 CHD1LQ86WJ1 897 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 CHL1O00533 1208 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 MPRIPQ6WCQ1 1025 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 C16orf71Q8IYS4 520 aaPredicted RBP7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 CABLES1Q8TDN4 633 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 SETD1AO15047 1707 aaKnown RBP7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 OVOS2A0A0J9YW53 1432 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 OVOS2Q6IE36 1432 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 GNAT3A8MTJ3 354 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms