RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-201ENST00000280154 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
PDCD4-201ENST00000280154 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
PDCD4-201ENST00000280154 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
PDCD4-201ENST00000280154 USP31Q70CQ4 1352 aa12.4□□□□□ -0.42
PDCD4-201ENST00000280154 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
PDCD4-201ENST00000280154 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
PDCD4-201ENST00000280154 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
PDCD4-201ENST00000280154 NSD2O96028 1365 aa12.4□□□□□ -0.42
PDCD4-201ENST00000280154 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
PDCD4-201ENST00000280154 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
PDCD4-201ENST00000280154 NFAT5O94916 1531 aa12.4□□□□□ -0.42
PDCD4-201ENST00000280154 FAM208AQ9UK61 1670 aaKnown RBP12.4□□□□□ -0.43
PDCD4-201ENST00000280154 PRAM1Q96QH2 718 aa12.39□□□□□ -0.43
PDCD4-201ENST00000280154 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
PDCD4-201ENST00000280154 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
PDCD4-201ENST00000280154 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
PDCD4-201ENST00000280154 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
PDCD4-201ENST00000280154 FOSBP53539 338 aa12.38□□□□□ -0.43
PDCD4-201ENST00000280154 HSPA2P54652 639 aa12.38□□□□□ -0.43
PDCD4-201ENST00000280154 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
PDCD4-201ENST00000280154 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
PDCD4-201ENST00000280154 PPP1R1BQ9UD71 204 aaPredicted RBP12.37□□□□□ -0.43
PDCD4-201ENST00000280154 USP6P35125 1406 aa12.37□□□□□ -0.43
PDCD4-201ENST00000280154 TMF1P82094 1093 aa12.37□□□□□ -0.43
PDCD4-201ENST00000280154 SLC26A8Q96RN1 970 aa12.37□□□□□ -0.43
PDCD4-201ENST00000280154 WNK3Q9BYP7 1800 aa12.37□□□□□ -0.43
PDCD4-201ENST00000280154 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
PDCD4-201ENST00000280154 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.36□□□□□ -0.43
PDCD4-201ENST00000280154 INSRP06213 1382 aa12.36□□□□□ -0.43
PDCD4-201ENST00000280154 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
PDCD4-201ENST00000280154 SBNO1A3KN83 1393 aa12.36□□□□□ -0.43
PDCD4-201ENST00000280154 PARD3Q8TEW0 1356 aa12.36□□□□□ -0.43
PDCD4-201ENST00000280154 PPIP5K1Q6PFW1 1433 aa12.35□□□□□ -0.43
PDCD4-201ENST00000280154 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
PDCD4-201ENST00000280154 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
PDCD4-201ENST00000280154 BRD1O95696 1058 aa12.35□□□□□ -0.43
PDCD4-201ENST00000280154 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
PDCD4-201ENST00000280154 LTN1O94822 1766 aa12.34□□□□□ -0.43
PDCD4-201ENST00000280154 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
PDCD4-201ENST00000280154 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
PDCD4-201ENST00000280154 NRAPQ86VF7 1730 aa12.34□□□□□ -0.43
PDCD4-201ENST00000280154 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
PDCD4-201ENST00000280154 C19orf44Q9H6X5 657 aa12.34□□□□□ -0.43
PDCD4-201ENST00000280154 ZNF335Q9H4Z2 1342 aaPredicted RBP12.33□□□□□ -0.44
PDCD4-201ENST00000280154 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
PDCD4-201ENST00000280154 A0A1W2PP64 1363 aa12.33□□□□□ -0.44
PDCD4-201ENST00000280154 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.44
PDCD4-201ENST00000280154 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
PDCD4-201ENST00000280154 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
PDCD4-201ENST00000280154 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
PDCD4-201ENST00000280154 PLEKHG2Q9H7P9 1386 aa12.31□□□□□ -0.44
PDCD4-201ENST00000280154 CDK19Q9BWU1 502 aa12.31□□□□□ -0.44
PDCD4-201ENST00000280154 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
PDCD4-201ENST00000280154 AATKQ6ZMQ8 1374 aa12.31□□□□□ -0.44
PDCD4-201ENST00000280154 NOL8Q76FK4 1167 aaKnown RBP12.3□□□□□ -0.44
PDCD4-201ENST00000280154 MSH6P52701 1360 aa12.3□□□□□ -0.44
PDCD4-201ENST00000280154 MAP2P11137 1827 aaKnown RBP12.29□□□□□ -0.44
PDCD4-201ENST00000280154 KIF24Q5T7B8 1368 aa12.29□□□□□ -0.44
PDCD4-201ENST00000280154 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
PDCD4-201ENST00000280154 USP19O94966 1318 aa12.29□□□□□ -0.44
PDCD4-201ENST00000280154 ADAMTS7Q9UKP4 1686 aa12.28□□□□□ -0.44
PDCD4-201ENST00000280154 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
PDCD4-201ENST00000280154 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
PDCD4-201ENST00000280154 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
PDCD4-201ENST00000280154 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
PDCD4-201ENST00000280154 TMCO4Q5TGY1 634 aa12.28□□□□□ -0.44
PDCD4-201ENST00000280154 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
PDCD4-201ENST00000280154 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
PDCD4-201ENST00000280154 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
PDCD4-201ENST00000280154 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
PDCD4-201ENST00000280154 ARMCX6Q7L4S7 300 aa12.26□□□□□ -0.45
PDCD4-201ENST00000280154 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
PDCD4-201ENST00000280154 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
PDCD4-201ENST00000280154 GPBP1L1Q9HC44 474 aaPredicted RBP12.26□□□□□ -0.45
PDCD4-201ENST00000280154 CDK12Q9NYV4 1490 aaPredicted RBP12.26□□□□□ -0.45
PDCD4-201ENST00000280154 TNS3Q68CZ2 1445 aa12.25□□□□□ -0.45
PDCD4-201ENST00000280154 POLD1P28340 1107 aa12.25□□□□□ -0.45
PDCD4-201ENST00000280154 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
PDCD4-201ENST00000280154 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
PDCD4-201ENST00000280154 PEX14O75381 377 aa12.24□□□□□ -0.45
PDCD4-201ENST00000280154 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
PDCD4-201ENST00000280154 IRX3P78415 501 aaPredicted RBP12.23□□□□□ -0.45
PDCD4-201ENST00000280154 POGKQ9P215 609 aa12.23□□□□□ -0.45
PDCD4-201ENST00000280154 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
PDCD4-201ENST00000280154 SHANK3Q9BYB0 1731 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 NEFMP07197 916 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 STK26Q9P289 416 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 CPDO75976 1380 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
PDCD4-201ENST00000280154 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 PARP4Q9UKK3 1724 aaKnown RBP12.22□□□□□ -0.45
PDCD4-201ENST00000280154 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
PDCD4-201ENST00000280154 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
PDCD4-201ENST00000280154 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 PIK3R5Q8WYR1 880 aa12.22□□□□□ -0.45
PDCD4-201ENST00000280154 RTL1A6NKG5 1358 aa12.21□□□□□ -0.45
PDCD4-201ENST00000280154 SGSM3Q96HU1 749 aa12.21□□□□□ -0.45
PDCD4-201ENST00000280154 RGPD5Q99666 1765 aa12.21□□□□□ -0.45
PDCD4-201ENST00000280154 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms