RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 CHAF1AQ13111 956 aaPredicted RBP13.87□□□□□ -0.19
SKP2-202ENST00000274255 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
SKP2-202ENST00000274255 CBX1P83916 185 aa13.86□□□□□ -0.19
SKP2-202ENST00000274255 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
SKP2-202ENST00000274255 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
SKP2-202ENST00000274255 JARID2Q92833 1246 aaPredicted RBP13.86□□□□□ -0.19
SKP2-202ENST00000274255 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
SKP2-202ENST00000274255 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
SKP2-202ENST00000274255 USHBP1Q8N6Y0 703 aa13.86□□□□□ -0.19
SKP2-202ENST00000274255 SYAP1Q96A49 352 aaPredicted RBP13.86□□□□□ -0.19
SKP2-202ENST00000274255 TTC12Q9H892 705 aaPredicted RBP13.86□□□□□ -0.19
SKP2-202ENST00000274255 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
SKP2-202ENST00000274255 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
SKP2-202ENST00000274255 SLC26A8Q96RN1 970 aa13.85□□□□□ -0.19
SKP2-202ENST00000274255 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
SKP2-202ENST00000274255 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
SKP2-202ENST00000274255 SIL1Q9H173 461 aa13.85□□□□□ -0.19
SKP2-202ENST00000274255 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
SKP2-202ENST00000274255 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
SKP2-202ENST00000274255 ERC2O15083 957 aa13.85□□□□□ -0.19
SKP2-202ENST00000274255 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
SKP2-202ENST00000274255 RRP9O43818 475 aaKnown RBP13.84□□□□□ -0.19
SKP2-202ENST00000274255 VAMP4O75379 141 aa13.84□□□□□ -0.19
SKP2-202ENST00000274255 SMC3Q9UQE7 1217 aa13.84□□□□□ -0.19
SKP2-202ENST00000274255 LMOD3Q0VAK6 560 aa13.84□□□□□ -0.19
SKP2-202ENST00000274255 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
SKP2-202ENST00000274255 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
SKP2-202ENST00000274255 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
SKP2-202ENST00000274255 FCHSD2O94868 740 aa13.83□□□□□ -0.19
SKP2-202ENST00000274255 PTMSP20962 102 aa13.83□□□□□ -0.2
SKP2-202ENST00000274255 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
SKP2-202ENST00000274255 TSPY26PQ9H489 355 aa13.83□□□□□ -0.2
SKP2-202ENST00000274255 GCC2Q8IWJ2 1684 aa13.83□□□□□ -0.2
SKP2-202ENST00000274255 HCLS1P14317 486 aaPredicted RBP13.82□□□□□ -0.2
SKP2-202ENST00000274255 C14orf93Q9H972 538 aaKnown RBP13.82□□□□□ -0.2
SKP2-202ENST00000274255 AAMPQ13685 434 aa13.82□□□□□ -0.2
SKP2-202ENST00000274255 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
SKP2-202ENST00000274255 G2E3Q7L622 706 aa13.82□□□□□ -0.2
SKP2-202ENST00000274255 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
SKP2-202ENST00000274255 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
SKP2-202ENST00000274255 POLKQ9UBT6 870 aa13.82□□□□□ -0.2
SKP2-202ENST00000274255 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
SKP2-202ENST00000274255 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
SKP2-202ENST00000274255 MRPL50Q8N5N7 158 aaKnown RBP13.81□□□□□ -0.2
SKP2-202ENST00000274255 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
SKP2-202ENST00000274255 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
SKP2-202ENST00000274255 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
SKP2-202ENST00000274255 UBTFL1P0CB47 393 aaPredicted RBP13.8□□□□□ -0.2
SKP2-202ENST00000274255 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 CCDC83Q8IWF9 413 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
SKP2-202ENST00000274255 NSFL1CQ9UNZ2 370 aaKnown RBP13.8□□□□□ -0.2
SKP2-202ENST00000274255 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 BICD2Q8TD16 824 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 KIAA0556O60303 1618 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 LRRIQ1Q96JM4 1722 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 NLRP6P59044 892 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 KLHL40Q2TBA0 621 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
SKP2-202ENST00000274255 TTC22Q5TAA0 569 aa13.79□□□□□ -0.2
SKP2-202ENST00000274255 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
SKP2-202ENST00000274255 POLR3AO14802 1390 aaPredicted RBP13.79□□□□□ -0.2
SKP2-202ENST00000274255 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
SKP2-202ENST00000274255 TPM2P07951 284 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 NECAB1Q8N987 351 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 SRGAP3O43295 1099 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 PIK3C2GO75747 1445 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 GNAI2P04899 355 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 INSRP06213 1382 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
SKP2-202ENST00000274255 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
SKP2-202ENST00000274255 SIRT2Q8IXJ6 389 aa13.77□□□□□ -0.2
SKP2-202ENST00000274255 DDX11Q96FC9 970 aa13.77□□□□□ -0.2
SKP2-202ENST00000274255 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.2
SKP2-202ENST00000274255 CCDC39Q9UFE4 941 aa13.77□□□□□ -0.2
SKP2-202ENST00000274255 FSD2A1L4K1 749 aa13.77□□□□□ -0.21
SKP2-202ENST00000274255 CNPY2Q9Y2B0 182 aa13.77□□□□□ -0.21
SKP2-202ENST00000274255 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.21
SKP2-202ENST00000274255 NUDT16Q96DE0 195 aaKnown RBP13.76□□□□□ -0.21
SKP2-202ENST00000274255 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
SKP2-202ENST00000274255 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
SKP2-202ENST00000274255 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
SKP2-202ENST00000274255 TRIM5Q9C035 493 aa13.76□□□□□ -0.21
SKP2-202ENST00000274255 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
SKP2-202ENST00000274255 CASTP20810 708 aaKnown RBP13.76□□□□□ -0.21
SKP2-202ENST00000274255 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
SKP2-202ENST00000274255 CREBRFQ8IUR6 639 aa13.76□□□□□ -0.21
SKP2-202ENST00000274255 JAKMIP1Q96N16 626 aaKnown RBP13.75□□□□□ -0.21
SKP2-202ENST00000274255 USP26Q9BXU7 913 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 H3BQV1 296 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 ZNF771Q7L3S4 317 aaPredicted RBP13.75□□□□□ -0.21
SKP2-202ENST00000274255 MX1P20591 662 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
SKP2-202ENST00000274255 TEFQ10587 303 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
SKP2-202ENST00000274255 PHF14O94880 888 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms