RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ANKARQ7Z5J8 1434 aa29.95■■■□□ 2.39
RAB40B-201ENST00000269347 IL16Q14005 1332 aa29.95■■■□□ 2.39
RAB40B-201ENST00000269347 RGPD1P0DJD0 1748 aa29.95■■■□□ 2.39
RAB40B-201ENST00000269347 MSH5O43196 834 aa29.95■■■□□ 2.38
RAB40B-201ENST00000269347 MAP3K19Q56UN5 1328 aa29.95■■■□□ 2.38
RAB40B-201ENST00000269347 FAM83GA6ND36 823 aa29.94■■■□□ 2.38
RAB40B-201ENST00000269347 CANXP27824 592 aaKnown RBP29.94■■■□□ 2.38
RAB40B-201ENST00000269347 TTC21AQ8NDW8 1320 aa29.94■■■□□ 2.38
RAB40B-201ENST00000269347 CLUAP1Q96AJ1 413 aa29.93■■■□□ 2.38
RAB40B-201ENST00000269347 NPHP4O75161 1426 aaPredicted RBP29.92■■■□□ 2.38
RAB40B-201ENST00000269347 IGHDP01880 384 aa29.91■■■□□ 2.38
RAB40B-201ENST00000269347 SSH1Q8WYL5 1049 aa29.91■■■□□ 2.38
RAB40B-201ENST00000269347 SULT6B1Q6IMI4 303 aa29.91■■■□□ 2.38
RAB40B-201ENST00000269347 DCTN1Q14203 1278 aa29.9■■■□□ 2.38
RAB40B-201ENST00000269347 LAS1LQ9Y4W2 734 aaKnown RBP29.9■■■□□ 2.38
RAB40B-201ENST00000269347 CENPQQ7L2Z9 268 aaPredicted RBP29.86■■■□□ 2.37
RAB40B-201ENST00000269347 NLRP6P59044 892 aa29.85■■■□□ 2.37
RAB40B-201ENST00000269347 TSPYL6Q8N831 410 aa29.84■■■□□ 2.37
RAB40B-201ENST00000269347 SMC4Q9NTJ3 1288 aa29.84■■■□□ 2.37
RAB40B-201ENST00000269347 ADGRL3Q9HAR2 1447 aa29.84■■■□□ 2.37
RAB40B-201ENST00000269347 TCERG1O14776 1098 aaKnown RBP29.84■■■□□ 2.37
RAB40B-201ENST00000269347 NEFMP07197 916 aa29.83■■■□□ 2.37
RAB40B-201ENST00000269347 ZNF853P0CG23 659 aa29.83■■■□□ 2.37
RAB40B-201ENST00000269347 PHF8Q9UPP1 1060 aa29.82■■■□□ 2.36
RAB40B-201ENST00000269347 CT47B1P0C2W7 299 aaPredicted RBP29.81■■■□□ 2.36
RAB40B-201ENST00000269347 MBIPQ9NS73 344 aa29.81■■■□□ 2.36
RAB40B-201ENST00000269347 PCDHB15Q9Y5E8 787 aa29.81■■■□□ 2.36
RAB40B-201ENST00000269347 TRIM27P14373 513 aa29.81■■■□□ 2.36
RAB40B-201ENST00000269347 USP54Q70EL1 1684 aa29.8■■■□□ 2.36
RAB40B-201ENST00000269347 PAK3O75914 559 aaPredicted RBP29.8■■■□□ 2.36
RAB40B-201ENST00000269347 SBNO1A3KN83 1393 aa29.8■■■□□ 2.36
RAB40B-201ENST00000269347 ABTB2Q8N961 1025 aa29.79■■■□□ 2.36
RAB40B-201ENST00000269347 NOB1Q9ULX3 412 aaKnown RBP29.79■■■□□ 2.36
RAB40B-201ENST00000269347 FLT4P35916 1363 aa29.78■■■□□ 2.36
RAB40B-201ENST00000269347 ZKSCAN2Q63HK3 967 aa29.78■■■□□ 2.36
RAB40B-201ENST00000269347 PDE4AP27815 886 aa29.77■■■□□ 2.36
RAB40B-201ENST00000269347 ANP32EQ9BTT0 268 aa29.77■■■□□ 2.36
RAB40B-201ENST00000269347 ELL2O00472 640 aaPredicted RBP29.77■■■□□ 2.36
RAB40B-201ENST00000269347 FOXO3O43524 673 aa29.76■■■□□ 2.35
RAB40B-201ENST00000269347 ORAI2Q96SN7 254 aa29.76■■■□□ 2.35
RAB40B-201ENST00000269347 VAMP4O75379 141 aa29.76■■■□□ 2.35
RAB40B-201ENST00000269347 ESCO1Q5FWF5 840 aa29.76■■■□□ 2.35
RAB40B-201ENST00000269347 EYA1Q99502 592 aa29.76■■■□□ 2.35
RAB40B-201ENST00000269347 IFT57Q9NWB7 429 aa29.75■■■□□ 2.35
RAB40B-201ENST00000269347 NWD1Q149M9 1564 aa29.75■■■□□ 2.35
RAB40B-201ENST00000269347 MCM10Q7L590 875 aa29.74■■■□□ 2.35
RAB40B-201ENST00000269347 AMPHP49418 695 aa29.74■■■□□ 2.35
RAB40B-201ENST00000269347 MVPQ14764 893 aaKnown RBP29.74■■■□□ 2.35
RAB40B-201ENST00000269347 DZIP1LQ8IYY4 767 aaKnown RBP29.74■■■□□ 2.35
RAB40B-201ENST00000269347 C8orf58Q8NAV2 365 aa29.74■■■□□ 2.35
RAB40B-201ENST00000269347 BACH2Q9BYV9 841 aa29.74■■■□□ 2.35
RAB40B-201ENST00000269347 C14orf37Q86TY3 774 aa29.73■■■□□ 2.35
RAB40B-201ENST00000269347 HOXC9P31274 260 aa29.72■■■□□ 2.35
RAB40B-201ENST00000269347 XPCQ01831 940 aaPredicted RBP29.72■■■□□ 2.35
RAB40B-201ENST00000269347 ARHGEF10O15013 1369 aa29.72■■■□□ 2.35
RAB40B-201ENST00000269347 LTN1O94822 1766 aa29.72■■■□□ 2.35
RAB40B-201ENST00000269347 MS4A1P11836 297 aa29.71■■■□□ 2.35
RAB40B-201ENST00000269347 GNAI1P63096 354 aa29.71■■■□□ 2.35
RAB40B-201ENST00000269347 ATF7IPQ6VMQ6 1270 aa29.71■■■□□ 2.35
RAB40B-201ENST00000269347 CFAP44Q96MT7 982 aa29.71■■■□□ 2.35
RAB40B-201ENST00000269347 KRT24Q2M2I5 525 aa29.71■■■□□ 2.35
RAB40B-201ENST00000269347 STRCP1A6NGW2 1772 aa29.7■■■□□ 2.35
RAB40B-201ENST00000269347 IGSF1Q8N6C5 1336 aa29.7■■■□□ 2.34
RAB40B-201ENST00000269347 KDRP35968 1356 aa29.7■■■□□ 2.34
RAB40B-201ENST00000269347 RGS3P49796 1198 aa29.69■■■□□ 2.34
RAB40B-201ENST00000269347 MTHFSDQ2M296 383 aaKnown RBP29.69■■■□□ 2.34
RAB40B-201ENST00000269347 FTSJ3Q8IY81 847 aaKnown RBP29.68■■■□□ 2.34
RAB40B-201ENST00000269347 TMEM57Q8N5G2 664 aa29.68■■■□□ 2.34
RAB40B-201ENST00000269347 ALDH1L2Q3SY69 923 aa29.66■■■□□ 2.34
RAB40B-201ENST00000269347 NFAT5O94916 1531 aa29.66■■■□□ 2.34
RAB40B-201ENST00000269347 LMOD3Q0VAK6 560 aa29.66■■■□□ 2.34
RAB40B-201ENST00000269347 MRPL50Q8N5N7 158 aaKnown RBP29.66■■■□□ 2.34
RAB40B-201ENST00000269347 LTV1Q96GA3 475 aaPredicted RBP29.66■■■□□ 2.34
RAB40B-201ENST00000269347 CALD1Q05682 793 aaKnown RBP29.64■■■□□ 2.34
RAB40B-201ENST00000269347 PSME1Q06323 249 aa29.64■■■□□ 2.34
RAB40B-201ENST00000269347 CRB1P82279 1406 aa29.63■■■□□ 2.33
RAB40B-201ENST00000269347 TWISTNBQ3B726 338 aaPredicted RBP29.63■■■□□ 2.33
RAB40B-201ENST00000269347 PROSER2Q86WR7 435 aaPredicted RBP29.63■■■□□ 2.33
RAB40B-201ENST00000269347 PLEKHG5O94827 1062 aa29.63■■■□□ 2.33
RAB40B-201ENST00000269347 ITPRIPQ8IWB1 547 aa29.63■■■□□ 2.33
RAB40B-201ENST00000269347 MIS18AQ9NYP9 233 aa29.62■■■□□ 2.33
RAB40B-201ENST00000269347 HSPA2P54652 639 aa29.62■■■□□ 2.33
RAB40B-201ENST00000269347 USHBP1Q8N6Y0 703 aa29.62■■■□□ 2.33
RAB40B-201ENST00000269347 RGPD2P0DJD1 1756 aa29.61■■■□□ 2.33
RAB40B-201ENST00000269347 CHL1O00533 1208 aa29.6■■■□□ 2.33
RAB40B-201ENST00000269347 BRPF1P55201 1214 aaPredicted RBP29.6■■■□□ 2.33
RAB40B-201ENST00000269347 KIF16BQ96L93 1317 aa29.6■■■□□ 2.33
RAB40B-201ENST00000269347 C8orf34Q49A92 452 aa29.59■■■□□ 2.33
RAB40B-201ENST00000269347 TRPM3Q9HCF6 1732 aaPredicted RBP29.58■■■□□ 2.33
RAB40B-201ENST00000269347 NPM2Q86SE8 214 aaKnown RBP29.56■■■□□ 2.32
RAB40B-201ENST00000269347 KIF24Q5T7B8 1368 aa29.55■■■□□ 2.32
RAB40B-201ENST00000269347 C1orf167Q5SNV9 1468 aa29.55■■■□□ 2.32
RAB40B-201ENST00000269347 DDX17Q92841 729 aaKnown RBP29.54■■■□□ 2.32
RAB40B-201ENST00000269347 ZNF428Q96B54 188 aa29.54■■■□□ 2.32
RAB40B-201ENST00000269347 ZBTB40Q9NUA8 1239 aa29.54■■■□□ 2.32
RAB40B-201ENST00000269347 ZBTB7CA1YPR0 619 aa29.53■■■□□ 2.32
RAB40B-201ENST00000269347 DDX19BQ9UMR2 479 aa29.53■■■□□ 2.32
RAB40B-201ENST00000269347 AAMPQ13685 434 aa29.53■■■□□ 2.32
RAB40B-201ENST00000269347 IPO8O15397 1037 aaKnown RBP29.52■■■□□ 2.32
RAB40B-201ENST00000269347 IP6K1Q92551 441 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms