RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
GAREM1-201ENST00000269209 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
GAREM1-201ENST00000269209 DLC1Q96QB1 1528 aa12.9□□□□□ -0.34
GAREM1-201ENST00000269209 C8orf58Q8NAV2 365 aa12.89□□□□□ -0.35
GAREM1-201ENST00000269209 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
GAREM1-201ENST00000269209 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
GAREM1-201ENST00000269209 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
GAREM1-201ENST00000269209 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
GAREM1-201ENST00000269209 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
GAREM1-201ENST00000269209 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
GAREM1-201ENST00000269209 IL16Q14005 1332 aa12.88□□□□□ -0.35
GAREM1-201ENST00000269209 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
GAREM1-201ENST00000269209 ZBTB7CA1YPR0 619 aa12.88□□□□□ -0.35
GAREM1-201ENST00000269209 VAMP4O75379 141 aa12.88□□□□□ -0.35
GAREM1-201ENST00000269209 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
GAREM1-201ENST00000269209 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
GAREM1-201ENST00000269209 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
GAREM1-201ENST00000269209 FOXO3O43524 673 aa12.87□□□□□ -0.35
GAREM1-201ENST00000269209 GNAI1P63096 354 aa12.87□□□□□ -0.35
GAREM1-201ENST00000269209 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
GAREM1-201ENST00000269209 KCNA6P17658 529 aa12.86□□□□□ -0.35
GAREM1-201ENST00000269209 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
GAREM1-201ENST00000269209 AMPHP49418 695 aa12.85□□□□□ -0.35
GAREM1-201ENST00000269209 NLRP6P59044 892 aa12.85□□□□□ -0.35
GAREM1-201ENST00000269209 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
GAREM1-201ENST00000269209 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
GAREM1-201ENST00000269209 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
GAREM1-201ENST00000269209 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
GAREM1-201ENST00000269209 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
GAREM1-201ENST00000269209 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
GAREM1-201ENST00000269209 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
GAREM1-201ENST00000269209 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
GAREM1-201ENST00000269209 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
GAREM1-201ENST00000269209 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
GAREM1-201ENST00000269209 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.35
GAREM1-201ENST00000269209 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.35
GAREM1-201ENST00000269209 SIRT1Q96EB6 747 aa12.83□□□□□ -0.35
GAREM1-201ENST00000269209 TECPR2O15040 1411 aa12.83□□□□□ -0.36
GAREM1-201ENST00000269209 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
GAREM1-201ENST00000269209 UBR1Q8IWV7 1749 aa12.83□□□□□ -0.36
GAREM1-201ENST00000269209 USP19O94966 1318 aa12.83□□□□□ -0.36
GAREM1-201ENST00000269209 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
GAREM1-201ENST00000269209 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
GAREM1-201ENST00000269209 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
GAREM1-201ENST00000269209 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
GAREM1-201ENST00000269209 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
GAREM1-201ENST00000269209 CDK12Q9NYV4 1490 aaPredicted RBP12.82□□□□□ -0.36
GAREM1-201ENST00000269209 APBB1O00213 710 aa12.82□□□□□ -0.36
GAREM1-201ENST00000269209 LMOD3Q0VAK6 560 aa12.82□□□□□ -0.36
GAREM1-201ENST00000269209 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
GAREM1-201ENST00000269209 USP6P35125 1406 aa12.81□□□□□ -0.36
GAREM1-201ENST00000269209 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
GAREM1-201ENST00000269209 AAMPQ13685 434 aa12.81□□□□□ -0.36
GAREM1-201ENST00000269209 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
GAREM1-201ENST00000269209 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
GAREM1-201ENST00000269209 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
GAREM1-201ENST00000269209 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
GAREM1-201ENST00000269209 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
GAREM1-201ENST00000269209 TBX22Q9Y458 520 aa12.8□□□□□ -0.36
GAREM1-201ENST00000269209 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
GAREM1-201ENST00000269209 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
GAREM1-201ENST00000269209 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
GAREM1-201ENST00000269209 MTHFSDQ2M296 383 aaKnown RBP12.79□□□□□ -0.36
GAREM1-201ENST00000269209 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
GAREM1-201ENST00000269209 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
GAREM1-201ENST00000269209 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
GAREM1-201ENST00000269209 EYA1Q99502 592 aa12.78□□□□□ -0.36
GAREM1-201ENST00000269209 SMC5Q8IY18 1101 aa12.77□□□□□ -0.36
GAREM1-201ENST00000269209 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
GAREM1-201ENST00000269209 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
GAREM1-201ENST00000269209 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
GAREM1-201ENST00000269209 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
GAREM1-201ENST00000269209 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
GAREM1-201ENST00000269209 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
GAREM1-201ENST00000269209 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
GAREM1-201ENST00000269209 F6X3S4 739 aa12.75□□□□□ -0.37
GAREM1-201ENST00000269209 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
GAREM1-201ENST00000269209 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
GAREM1-201ENST00000269209 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
GAREM1-201ENST00000269209 C3P01024 1663 aa12.74□□□□□ -0.37
GAREM1-201ENST00000269209 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
GAREM1-201ENST00000269209 NUCB1Q02818 461 aa12.74□□□□□ -0.37
GAREM1-201ENST00000269209 CHL1O00533 1208 aa12.74□□□□□ -0.37
GAREM1-201ENST00000269209 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
GAREM1-201ENST00000269209 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
GAREM1-201ENST00000269209 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
GAREM1-201ENST00000269209 BECN1Q14457 450 aa12.73□□□□□ -0.37
GAREM1-201ENST00000269209 G2E3Q7L622 706 aa12.73□□□□□ -0.37
GAREM1-201ENST00000269209 FLT4P35916 1363 aa12.73□□□□□ -0.37
GAREM1-201ENST00000269209 ANKLE2Q86XL3 938 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 PSME1Q06323 249 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 ABCC4O15439 1325 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 RGPD8O14715 1765 aaPredicted RBP12.72□□□□□ -0.37
GAREM1-201ENST00000269209 HOXC9P31274 260 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 MEIS3Q99687 375 aa12.72□□□□□ -0.37
GAREM1-201ENST00000269209 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms