RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 PIK3R4Q99570 1358 aa21.75■■□□□ 1.07
CHKA-201ENST00000265689 MS4A1P11836 297 aa21.75■■□□□ 1.07
CHKA-201ENST00000265689 PROSER2Q86WR7 435 aaPredicted RBP21.75■■□□□ 1.07
CHKA-201ENST00000265689 NFE2L2Q16236 605 aa21.75■■□□□ 1.07
CHKA-201ENST00000265689 OVOS2A0A0J9YW53 1432 aa21.75■■□□□ 1.07
CHKA-201ENST00000265689 OVOS2Q6IE36 1432 aa21.75■■□□□ 1.07
CHKA-201ENST00000265689 CT47B1P0C2W7 299 aaPredicted RBP21.74■■□□□ 1.07
CHKA-201ENST00000265689 ORAI2Q96SN7 254 aa21.74■■□□□ 1.07
CHKA-201ENST00000265689 PDE4AP27815 886 aa21.73■■□□□ 1.07
CHKA-201ENST00000265689 CLUAP1Q96AJ1 413 aa21.73■■□□□ 1.07
CHKA-201ENST00000265689 SSH2Q76I76 1423 aa21.73■■□□□ 1.07
CHKA-201ENST00000265689 ESCO1Q5FWF5 840 aa21.72■■□□□ 1.07
CHKA-201ENST00000265689 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
CHKA-201ENST00000265689 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
CHKA-201ENST00000265689 THUMPD2Q9BTF0 503 aaKnown RBP21.72■■□□□ 1.07
CHKA-201ENST00000265689 IGHDP01880 384 aa21.71■■□□□ 1.07
CHKA-201ENST00000265689 SMC4Q9NTJ3 1288 aa21.71■■□□□ 1.07
CHKA-201ENST00000265689 EIF4A2Q14240 407 aaKnown RBP21.7■■□□□ 1.06
CHKA-201ENST00000265689 SSH1Q8WYL5 1049 aa21.7■■□□□ 1.06
CHKA-201ENST00000265689 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
CHKA-201ENST00000265689 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
CHKA-201ENST00000265689 STRCQ7RTU9 1775 aa21.7■■□□□ 1.06
CHKA-201ENST00000265689 BACH2Q9BYV9 841 aa21.7■■□□□ 1.06
CHKA-201ENST00000265689 ZKSCAN2Q63HK3 967 aa21.68■■□□□ 1.06
CHKA-201ENST00000265689 TTC21AQ8NDW8 1320 aa21.68■■□□□ 1.06
CHKA-201ENST00000265689 USP31Q70CQ4 1352 aa21.68■■□□□ 1.06
CHKA-201ENST00000265689 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
CHKA-201ENST00000265689 AEBP1Q8IUX7 1158 aa21.67■■□□□ 1.06
CHKA-201ENST00000265689 ADGRL3Q9HAR2 1447 aa21.67■■□□□ 1.06
CHKA-201ENST00000265689 FOXO3O43524 673 aa21.67■■□□□ 1.06
CHKA-201ENST00000265689 ZNF335Q9H4Z2 1342 aaPredicted RBP21.66■■□□□ 1.06
CHKA-201ENST00000265689 TMEM94Q12767 1356 aa21.65■■□□□ 1.06
CHKA-201ENST00000265689 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
CHKA-201ENST00000265689 SULT6B1Q6IMI4 303 aa21.65■■□□□ 1.06
CHKA-201ENST00000265689 PHF8Q9UPP1 1060 aa21.65■■□□□ 1.06
CHKA-201ENST00000265689 DZIP1LQ8IYY4 767 aaKnown RBP21.64■■□□□ 1.06
CHKA-201ENST00000265689 FTSJ3Q8IY81 847 aaKnown RBP21.64■■□□□ 1.05
CHKA-201ENST00000265689 FAM83GA6ND36 823 aa21.63■■□□□ 1.05
CHKA-201ENST00000265689 TRIM27P14373 513 aa21.63■■□□□ 1.05
CHKA-201ENST00000265689 ANP32AP39687 249 aaKnown RBP21.63■■□□□ 1.05
CHKA-201ENST00000265689 RGS3P49796 1198 aa21.63■■□□□ 1.05
CHKA-201ENST00000265689 ANKARQ7Z5J8 1434 aa21.63■■□□□ 1.05
CHKA-201ENST00000265689 PCDHB15Q9Y5E8 787 aa21.63■■□□□ 1.05
CHKA-201ENST00000265689 MAP3K19Q56UN5 1328 aa21.63■■□□□ 1.05
CHKA-201ENST00000265689 MVPQ14764 893 aaKnown RBP21.63■■□□□ 1.05
CHKA-201ENST00000265689 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
CHKA-201ENST00000265689 PIK3C2AO00443 1686 aa21.62■■□□□ 1.05
CHKA-201ENST00000265689 CALD1Q05682 793 aaKnown RBP21.62■■□□□ 1.05
CHKA-201ENST00000265689 NWD1Q149M9 1564 aa21.62■■□□□ 1.05
CHKA-201ENST00000265689 NLRP6P59044 892 aa21.61■■□□□ 1.05
CHKA-201ENST00000265689 GNAI1P63096 354 aa21.61■■□□□ 1.05
CHKA-201ENST00000265689 AAMPQ13685 434 aa21.61■■□□□ 1.05
CHKA-201ENST00000265689 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
CHKA-201ENST00000265689 ABTB2Q8N961 1025 aa21.61■■□□□ 1.05
CHKA-201ENST00000265689 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
CHKA-201ENST00000265689 DLG5Q8TDM6 1919 aa21.6■■□□□ 1.05
CHKA-201ENST00000265689 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
CHKA-201ENST00000265689 LMOD3Q0VAK6 560 aa21.6■■□□□ 1.05
CHKA-201ENST00000265689 ATF7IPQ6VMQ6 1270 aa21.6■■□□□ 1.05
CHKA-201ENST00000265689 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
CHKA-201ENST00000265689 MBIPQ9NS73 344 aa21.6■■□□□ 1.05
CHKA-201ENST00000265689 LMOD2Q6P5Q4 547 aa21.6■■□□□ 1.05
CHKA-201ENST00000265689 TSPYL6Q8N831 410 aa21.59■■□□□ 1.05
CHKA-201ENST00000265689 ZBTB7CA1YPR0 619 aa21.58■■□□□ 1.04
CHKA-201ENST00000265689 PSME1Q06323 249 aa21.58■■□□□ 1.04
CHKA-201ENST00000265689 ALDH1L2Q3SY69 923 aa21.58■■□□□ 1.04
CHKA-201ENST00000265689 ELL2O00472 640 aaPredicted RBP21.57■■□□□ 1.04
CHKA-201ENST00000265689 VAMP4O75379 141 aa21.57■■□□□ 1.04
CHKA-201ENST00000265689 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
CHKA-201ENST00000265689 CFAP44Q96MT7 982 aa21.56■■□□□ 1.04
CHKA-201ENST00000265689 KIF16BQ96L93 1317 aa21.56■■□□□ 1.04
CHKA-201ENST00000265689 SBNO1A3KN83 1393 aa21.56■■□□□ 1.04
CHKA-201ENST00000265689 AMPHP49418 695 aa21.56■■□□□ 1.04
CHKA-201ENST00000265689 ITPRIPQ8IWB1 547 aa21.56■■□□□ 1.04
CHKA-201ENST00000265689 IPO9Q96P70 1041 aaKnown RBP21.56■■□□□ 1.04
CHKA-201ENST00000265689 MARF1Q9Y4F3 1742 aaKnown RBP21.55■■□□□ 1.04
CHKA-201ENST00000265689 FLT4P35916 1363 aa21.55■■□□□ 1.04
CHKA-201ENST00000265689 C19orf44Q9H6X5 657 aa21.55■■□□□ 1.04
CHKA-201ENST00000265689 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
CHKA-201ENST00000265689 RGPD1P0DJD0 1748 aa21.55■■□□□ 1.04
CHKA-201ENST00000265689 IPO8O15397 1037 aaKnown RBP21.54■■□□□ 1.04
CHKA-201ENST00000265689 TMEM57Q8N5G2 664 aa21.54■■□□□ 1.04
CHKA-201ENST00000265689 ZNF428Q96B54 188 aa21.54■■□□□ 1.04
CHKA-201ENST00000265689 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
CHKA-201ENST00000265689 C8orf58Q8NAV2 365 aa21.53■■□□□ 1.04
CHKA-201ENST00000265689 FAM161AQ3B820 660 aa21.52■■□□□ 1.04
CHKA-201ENST00000265689 NOP58Q9Y2X3 529 aaKnown RBP21.52■■□□□ 1.04
CHKA-201ENST00000265689 ATF3P18847 181 aa21.52■■□□□ 1.03
CHKA-201ENST00000265689 MCM10Q7L590 875 aa21.52■■□□□ 1.03
CHKA-201ENST00000265689 DDX19BQ9UMR2 479 aa21.52■■□□□ 1.03
CHKA-201ENST00000265689 ARHGEF10O15013 1369 aa21.52■■□□□ 1.03
CHKA-201ENST00000265689 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
CHKA-201ENST00000265689 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
CHKA-201ENST00000265689 RWDD1Q9H446 243 aaPredicted RBP21.51■■□□□ 1.03
CHKA-201ENST00000265689 C1orf167Q5SNV9 1468 aa21.51■■□□□ 1.03
CHKA-201ENST00000265689 BRPF1P55201 1214 aaPredicted RBP21.51■■□□□ 1.03
CHKA-201ENST00000265689 LTV1Q96GA3 475 aaPredicted RBP21.51■■□□□ 1.03
CHKA-201ENST00000265689 EYA1Q99502 592 aa21.5■■□□□ 1.03
CHKA-201ENST00000265689 HOXC9P31274 260 aa21.48■■□□□ 1.03
CHKA-201ENST00000265689 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms