RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
CUL3-201ENST00000264414 UBA5Q9GZZ9 404 aa17.5■□□□□ 0.39
CUL3-201ENST00000264414 DESP17661 470 aa17.5■□□□□ 0.39
CUL3-201ENST00000264414 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
CUL3-201ENST00000264414 GIMAP7Q8NHV1 300 aa17.5■□□□□ 0.39
CUL3-201ENST00000264414 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
CUL3-201ENST00000264414 CDC45O75419 566 aa17.49■□□□□ 0.39
CUL3-201ENST00000264414 CABP2Q9NPB3 220 aa17.49■□□□□ 0.39
CUL3-201ENST00000264414 ESCO1Q5FWF5 840 aa17.48■□□□□ 0.39
CUL3-201ENST00000264414 WIZO95785 1651 aa17.48■□□□□ 0.39
CUL3-201ENST00000264414 GRM1Q13255 1194 aa17.48■□□□□ 0.39
CUL3-201ENST00000264414 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
CUL3-201ENST00000264414 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
CUL3-201ENST00000264414 NLRP6P59044 892 aa17.47■□□□□ 0.39
CUL3-201ENST00000264414 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
CUL3-201ENST00000264414 SMC1AQ14683 1233 aaKnown RBP17.46■□□□□ 0.39
CUL3-201ENST00000264414 GRIPAP1Q4V328 841 aa17.46■□□□□ 0.39
CUL3-201ENST00000264414 INCENPQ9NQS7 918 aa17.46■□□□□ 0.39
CUL3-201ENST00000264414 TRAK2O60296 914 aa17.46■□□□□ 0.39
CUL3-201ENST00000264414 CCDC91Q7Z6B0 441 aa17.46■□□□□ 0.39
CUL3-201ENST00000264414 EIF5P55010 431 aaKnown RBP17.45■□□□□ 0.38
CUL3-201ENST00000264414 LUC7LQ9NQ29 371 aaKnown RBP17.45■□□□□ 0.38
CUL3-201ENST00000264414 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
CUL3-201ENST00000264414 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
CUL3-201ENST00000264414 TDO2P48775 406 aa17.45■□□□□ 0.38
CUL3-201ENST00000264414 CCDC178Q5BJE1 867 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 SRRTQ9BXP5 876 aaKnown RBP17.44■□□□□ 0.38
CUL3-201ENST00000264414 RAI14Q9P0K7 980 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 WASHC2AQ641Q2 1341 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 CCP110O43303 1012 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 DDX23Q9BUQ8 820 aaKnown RBP17.44■□□□□ 0.38
CUL3-201ENST00000264414 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 TMCO5BA8MYB1 307 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
CUL3-201ENST00000264414 VGFO15240 615 aaPredicted RBP17.43■□□□□ 0.38
CUL3-201ENST00000264414 RABEP1Q15276 862 aa17.43■□□□□ 0.38
CUL3-201ENST00000264414 TAF4BQ92750 862 aa17.43■□□□□ 0.38
CUL3-201ENST00000264414 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.43■□□□□ 0.38
CUL3-201ENST00000264414 GNAI1P63096 354 aa17.43■□□□□ 0.38
CUL3-201ENST00000264414 SLC4A8Q2Y0W8 1093 aa17.43■□□□□ 0.38
CUL3-201ENST00000264414 DRC1Q96MC2 740 aa17.43■□□□□ 0.38
CUL3-201ENST00000264414 GSTTP1A0A1W2PQM5 241 aa17.42■□□□□ 0.38
CUL3-201ENST00000264414 STAMBPO95630 424 aa17.42■□□□□ 0.38
CUL3-201ENST00000264414 CABP4P57796 275 aa17.42■□□□□ 0.38
CUL3-201ENST00000264414 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
CUL3-201ENST00000264414 ZFP91Q96JP5 570 aaPredicted RBP17.42■□□□□ 0.38
CUL3-201ENST00000264414 TRERF1Q96PN7 1200 aa17.42■□□□□ 0.38
CUL3-201ENST00000264414 BRPF3Q9ULD4 1205 aa17.42■□□□□ 0.38
CUL3-201ENST00000264414 LETM1O95202 739 aaPredicted RBP17.42■□□□□ 0.38
CUL3-201ENST00000264414 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
CUL3-201ENST00000264414 CAMK4Q16566 473 aa17.41■□□□□ 0.38
CUL3-201ENST00000264414 FILIP1Q7Z7B0 1213 aa17.41■□□□□ 0.38
CUL3-201ENST00000264414 PIP4K2AP48426 406 aaPredicted RBP17.41■□□□□ 0.38
CUL3-201ENST00000264414 BMP2KQ9NSY1 1161 aaPredicted RBP17.41■□□□□ 0.38
CUL3-201ENST00000264414 TRIM21P19474 475 aaKnown RBP17.4■□□□□ 0.38
CUL3-201ENST00000264414 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
CUL3-201ENST00000264414 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
CUL3-201ENST00000264414 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
CUL3-201ENST00000264414 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
CUL3-201ENST00000264414 CEP57L1Q8IYX8 460 aa17.4■□□□□ 0.38
CUL3-201ENST00000264414 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
CUL3-201ENST00000264414 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.38
CUL3-201ENST00000264414 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 TERF1P54274 439 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 ZNF354CQ86Y25 554 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 ARL1P40616 181 aaPredicted RBP17.39■□□□□ 0.37
CUL3-201ENST00000264414 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 SLC26A8Q96RN1 970 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 DACH1Q9UI36 760 aa17.39■□□□□ 0.37
CUL3-201ENST00000264414 MRPS9P82933 396 aaKnown RBP17.39■□□□□ 0.37
CUL3-201ENST00000264414 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
CUL3-201ENST00000264414 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.37
CUL3-201ENST00000264414 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 ABCF2Q9UG63 623 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.38■□□□□ 0.37
CUL3-201ENST00000264414 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 UQCRHLA0A096LP55 91 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 UQCRHP07919 91 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 MRE11P49959 708 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 HOMER2Q9NSB8 354 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 EIF3JO75822 258 aaKnown RBP17.38■□□□□ 0.37
CUL3-201ENST00000264414 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 RNF187Q5TA31 235 aaPredicted RBP17.38■□□□□ 0.37
CUL3-201ENST00000264414 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
CUL3-201ENST00000264414 EPB41L2O43491 1005 aaKnown RBP17.37■□□□□ 0.37
CUL3-201ENST00000264414 APBB1IPQ7Z5R6 666 aaPredicted RBP17.37■□□□□ 0.37
CUL3-201ENST00000264414 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
CUL3-201ENST00000264414 CYP46A1Q9Y6A2 500 aa17.37■□□□□ 0.37
CUL3-201ENST00000264414 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
CUL3-201ENST00000264414 ERLIN1O75477 346 aa17.37■□□□□ 0.37
CUL3-201ENST00000264414 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
CUL3-201ENST00000264414 ZBTB9Q96C00 473 aa17.36■□□□□ 0.37
CUL3-201ENST00000264414 LARP1BQ659C4 914 aaKnown RBP17.36■□□□□ 0.37
CUL3-201ENST00000264414 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
CUL3-201ENST00000264414 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
CUL3-201ENST00000264414 CTNNA2P26232 953 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms