RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 ZNF521Q96K83 1311 aa15.46■□□□□ 0.07
HERC6-201ENST00000264346 PPIP5K1Q6PFW1 1433 aa15.46■□□□□ 0.07
HERC6-201ENST00000264346 MAP4K4O95819 1239 aaPredicted RBP15.46■□□□□ 0.07
HERC6-201ENST00000264346 IL1RAPL2Q9NP60 686 aa15.46■□□□□ 0.07
HERC6-201ENST00000264346 GCC1Q96CN9 775 aa15.46■□□□□ 0.06
HERC6-201ENST00000264346 TRPM2O94759 1503 aa15.45■□□□□ 0.06
HERC6-201ENST00000264346 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
HERC6-201ENST00000264346 SURF6O75683 361 aaKnown RBP15.45■□□□□ 0.06
HERC6-201ENST00000264346 TSHZ3Q63HK5 1081 aa15.45■□□□□ 0.06
HERC6-201ENST00000264346 GAS2L2Q8NHY3 880 aa15.45■□□□□ 0.06
HERC6-201ENST00000264346 IFT57Q9NWB7 429 aa15.45■□□□□ 0.06
HERC6-201ENST00000264346 UBTFL1P0CB47 393 aaPredicted RBP15.45■□□□□ 0.06
HERC6-201ENST00000264346 CCDC27Q2M243 656 aa15.44■□□□□ 0.06
HERC6-201ENST00000264346 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
HERC6-201ENST00000264346 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
HERC6-201ENST00000264346 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
HERC6-201ENST00000264346 EIF4A2Q14240 407 aaKnown RBP15.44■□□□□ 0.06
HERC6-201ENST00000264346 IQGAP3Q86VI3 1631 aa15.43■□□□□ 0.06
HERC6-201ENST00000264346 ABCC11Q96J66 1382 aa15.43■□□□□ 0.06
HERC6-201ENST00000264346 ANXA1P04083 346 aa15.43■□□□□ 0.06
HERC6-201ENST00000264346 ALDH1L2Q3SY69 923 aa15.43■□□□□ 0.06
HERC6-201ENST00000264346 INTS3Q68E01 1043 aaKnown RBP15.43■□□□□ 0.06
HERC6-201ENST00000264346 VAMP4O75379 141 aa15.42■□□□□ 0.06
HERC6-201ENST00000264346 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
HERC6-201ENST00000264346 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
HERC6-201ENST00000264346 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
HERC6-201ENST00000264346 ZNF530Q6P9A1 599 aaPredicted RBP15.41■□□□□ 0.06
HERC6-201ENST00000264346 REC8O95072 547 aa15.41■□□□□ 0.06
HERC6-201ENST00000264346 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
HERC6-201ENST00000264346 TRAK2O60296 914 aa15.4■□□□□ 0.06
HERC6-201ENST00000264346 GNAI2P04899 355 aa15.4■□□□□ 0.06
HERC6-201ENST00000264346 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
HERC6-201ENST00000264346 MEIS3Q99687 375 aa15.4■□□□□ 0.06
HERC6-201ENST00000264346 TRMT2AQ8IZ69 625 aaKnown RBP15.4■□□□□ 0.06
HERC6-201ENST00000264346 KDM5AP29375 1690 aaKnown RBP15.4■□□□□ 0.06
HERC6-201ENST00000264346 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
HERC6-201ENST00000264346 TNRQ92752 1358 aa15.4■□□□□ 0.06
HERC6-201ENST00000264346 NEK4P51957 841 aa15.4■□□□□ 0.06
HERC6-201ENST00000264346 MCTP1Q6DN14 999 aa15.39■□□□□ 0.05
HERC6-201ENST00000264346 PLXNC1O60486 1568 aa15.39■□□□□ 0.05
HERC6-201ENST00000264346 DDX11L8A8MPP1 907 aa15.39■□□□□ 0.05
HERC6-201ENST00000264346 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
HERC6-201ENST00000264346 UNC13BO14795 1591 aa15.39■□□□□ 0.05
HERC6-201ENST00000264346 TBC1D32Q96NH3 1257 aa15.39■□□□□ 0.05
HERC6-201ENST00000264346 MPRIPQ6WCQ1 1025 aa15.38■□□□□ 0.05
HERC6-201ENST00000264346 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
HERC6-201ENST00000264346 RAPGEF4Q8WZA2 1011 aa15.38■□□□□ 0.05
HERC6-201ENST00000264346 ZBTB40Q9NUA8 1239 aa15.38■□□□□ 0.05
HERC6-201ENST00000264346 E9PCH4 1651 aa15.37■□□□□ 0.05
HERC6-201ENST00000264346 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
HERC6-201ENST00000264346 GNAI3P08754 354 aa15.37■□□□□ 0.05
HERC6-201ENST00000264346 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 RRAGDQ9NQL2 400 aaPredicted RBP15.36■□□□□ 0.05
HERC6-201ENST00000264346 DIAPH3Q9NSV4 1193 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 IL16Q14005 1332 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 SIL1Q9H173 461 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 MYL6BP14649 208 aa15.36■□□□□ 0.05
HERC6-201ENST00000264346 DNTTIP2Q5QJE6 756 aaKnown RBP15.36■□□□□ 0.05
HERC6-201ENST00000264346 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
HERC6-201ENST00000264346 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
HERC6-201ENST00000264346 IL13P35225 146 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 MTHFSDQ2M296 383 aaKnown RBP15.35■□□□□ 0.05
HERC6-201ENST00000264346 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 MCM4P33991 863 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
HERC6-201ENST00000264346 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 LTKP29376 864 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
HERC6-201ENST00000264346 PHF8Q9UPP1 1060 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 KIF1BO60333 1816 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 GOLGA6L4A6NEF3 574 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 NUCB1Q02818 461 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 FAM43AQ8N2R8 423 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 CCT4P50991 539 aaKnown RBP15.34■□□□□ 0.05
HERC6-201ENST00000264346 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 MAP3K19Q56UN5 1328 aa15.34■□□□□ 0.05
HERC6-201ENST00000264346 KCNA6P17658 529 aa15.33■□□□□ 0.05
HERC6-201ENST00000264346 ATF3P18847 181 aa15.33■□□□□ 0.05
HERC6-201ENST00000264346 GPATCH3Q96I76 525 aa15.33■□□□□ 0.05
HERC6-201ENST00000264346 SYNMO15061 1565 aa15.33■□□□□ 0.05
HERC6-201ENST00000264346 G2E3Q7L622 706 aa15.33■□□□□ 0.04
HERC6-201ENST00000264346 RPAP2Q8IXW5 612 aaPredicted RBP15.33■□□□□ 0.04
HERC6-201ENST00000264346 UPF3BQ9BZI7 483 aaKnown RBP15.33■□□□□ 0.04
HERC6-201ENST00000264346 SRCIN1Q9C0H9 1055 aa15.33■□□□□ 0.04
HERC6-201ENST00000264346 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
HERC6-201ENST00000264346 TSPOAP1O95153 1857 aa15.33■□□□□ 0.04
HERC6-201ENST00000264346 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
HERC6-201ENST00000264346 DDX54Q8TDD1 881 aaKnown RBP15.33■□□□□ 0.04
HERC6-201ENST00000264346 OTUD7AQ8TE49 926 aaPredicted RBP15.33■□□□□ 0.04
HERC6-201ENST00000264346 PLEKHF1Q96S99 279 aa15.33■□□□□ 0.04
HERC6-201ENST00000264346 METP08581 1390 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 FLIIQ13045 1269 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 PANK2Q9BZ23 570 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 EYA1Q99502 592 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 TET3O43151 1660 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms