RNA–Protein interactions for RNA: ENST00000263377.6

BRD4-201, Transcript of bromodomain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD4, Length 7,169 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-201ENST00000263377 LRRCC1Q9C099 1032 aa13.52□□□□□ -0.25
BRD4-201ENST00000263377 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.25
BRD4-201ENST00000263377 WWC1Q8IX03 1113 aa13.52□□□□□ -0.25
BRD4-201ENST00000263377 NUDT16Q96DE0 195 aaKnown RBP13.52□□□□□ -0.25
BRD4-201ENST00000263377 CCDC158Q5M9N0 1113 aa13.51□□□□□ -0.25
BRD4-201ENST00000263377 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
BRD4-201ENST00000263377 RAPGEF6Q8TEU7 1601 aa13.51□□□□□ -0.25
BRD4-201ENST00000263377 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
BRD4-201ENST00000263377 CCDC43Q96MW1 224 aaKnown RBP13.5□□□□□ -0.25
BRD4-201ENST00000263377 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
BRD4-201ENST00000263377 RABEP1Q15276 862 aa13.5□□□□□ -0.25
BRD4-201ENST00000263377 BTBD11A6QL63 1104 aa13.5□□□□□ -0.25
BRD4-201ENST00000263377 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
BRD4-201ENST00000263377 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
BRD4-201ENST00000263377 RRP12Q5JTH9 1297 aaKnown RBP13.49□□□□□ -0.25
BRD4-201ENST00000263377 HOMER1Q86YM7 354 aa13.49□□□□□ -0.25
BRD4-201ENST00000263377 FCHSD2O94868 740 aa13.49□□□□□ -0.25
BRD4-201ENST00000263377 XBP1P17861 261 aa13.49□□□□□ -0.25
BRD4-201ENST00000263377 WDR62O43379 1518 aa13.49□□□□□ -0.25
BRD4-201ENST00000263377 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
BRD4-201ENST00000263377 KIAA0556O60303 1618 aa13.49□□□□□ -0.25
BRD4-201ENST00000263377 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
BRD4-201ENST00000263377 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
BRD4-201ENST00000263377 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
BRD4-201ENST00000263377 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
BRD4-201ENST00000263377 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 RNF214Q8ND24 703 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 PRDM11Q9NQV5 511 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 STK11IPQ8N1F8 1099 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 MIS18AQ9NYP9 233 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 FANCAO15360 1455 aa13.47□□□□□ -0.25
BRD4-201ENST00000263377 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
BRD4-201ENST00000263377 AACSQ86V21 672 aa13.46□□□□□ -0.25
BRD4-201ENST00000263377 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.25
BRD4-201ENST00000263377 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
BRD4-201ENST00000263377 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.254e-7■□□□□ 11.2
BRD4-201ENST00000263377 ATP2B1P20020 1258 aa13.46□□□□□ -0.25
BRD4-201ENST00000263377 STK3Q13188 491 aa13.46□□□□□ -0.25
BRD4-201ENST00000263377 CAVIN1Q6NZI2 390 aaKnown RBP13.46□□□□□ -0.25
BRD4-201ENST00000263377 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
BRD4-201ENST00000263377 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.25
BRD4-201ENST00000263377 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.26
BRD4-201ENST00000263377 THUMPD2Q9BTF0 503 aaKnown RBP13.46□□□□□ -0.26
BRD4-201ENST00000263377 GNL3LQ9NVN8 582 aaKnown RBP13.46□□□□□ -0.26
BRD4-201ENST00000263377 IFT57Q9NWB7 429 aa13.46□□□□□ -0.26
BRD4-201ENST00000263377 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
BRD4-201ENST00000263377 MCM10Q7L590 875 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 TRAK2O60296 914 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 SLC3A2P08195 630 aaKnown RBP13.45□□□□□ -0.26
BRD4-201ENST00000263377 MCM2P49736 904 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
BRD4-201ENST00000263377 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
BRD4-201ENST00000263377 CEBPZQ03701 1054 aaKnown RBP13.44□□□□□ -0.26
BRD4-201ENST00000263377 NME9Q86XW9 330 aa13.44□□□□□ -0.26
BRD4-201ENST00000263377 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
BRD4-201ENST00000263377 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
BRD4-201ENST00000263377 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
BRD4-201ENST00000263377 PDILTQ8N807 584 aa13.44□□□□□ -0.26
BRD4-201ENST00000263377 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
BRD4-201ENST00000263377 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
BRD4-201ENST00000263377 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
BRD4-201ENST00000263377 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
BRD4-201ENST00000263377 FIBPO43427 364 aa13.43□□□□□ -0.26
BRD4-201ENST00000263377 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
BRD4-201ENST00000263377 MRE11P49959 708 aa13.43□□□□□ -0.26
BRD4-201ENST00000263377 NAP1L1P55209 391 aaKnown RBP13.43□□□□□ -0.26
BRD4-201ENST00000263377 USHBP1Q8N6Y0 703 aa13.43□□□□□ -0.26
BRD4-201ENST00000263377 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 GPS2Q13227 327 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 CCDC39Q9UFE4 941 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 DUOX2Q9NRD8 1548 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
BRD4-201ENST00000263377 FBXO31Q5XUX0 539 aaPredicted RBP13.42□□□□□ -0.26
BRD4-201ENST00000263377 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 ZNF396Q96N95 335 aaPredicted RBP13.42□□□□□ -0.26
BRD4-201ENST00000263377 CFAP43Q8NDM7 1665 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 LETM1O95202 739 aaPredicted RBP13.42□□□□□ -0.26
BRD4-201ENST00000263377 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
BRD4-201ENST00000263377 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
BRD4-201ENST00000263377 DISP1Q96F81 1524 aa13.41□□□□□ -0.26
BRD4-201ENST00000263377 K7ELQ4 463 aaPredicted RBP13.41□□□□□ -0.26
BRD4-201ENST00000263377 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
BRD4-201ENST00000263377 KCNH5Q8NCM2 988 aa13.41□□□□□ -0.26
BRD4-201ENST00000263377 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
BRD4-201ENST00000263377 STK38Q15208 465 aa13.41□□□□□ -0.26
BRD4-201ENST00000263377 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
BRD4-201ENST00000263377 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
BRD4-201ENST00000263377 DUSP27Q5VZP5 1158 aa13.41□□□□□ -0.26
BRD4-201ENST00000263377 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
BRD4-201ENST00000263377 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
BRD4-201ENST00000263377 MBD3O95983 291 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms