RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
PTPN3-201ENST00000262539 TEFQ10587 303 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 ATF7IPQ6VMQ6 1270 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 GNAI3P08754 354 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 METP08581 1390 aa10.29□□□□□ -0.76
PTPN3-201ENST00000262539 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
PTPN3-201ENST00000262539 ADAMTS13Q76LX8 1427 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 RPAP2Q8IXW5 612 aaPredicted RBP10.28□□□□□ -0.76
PTPN3-201ENST00000262539 KRI1Q8N9T8 703 aaKnown RBP10.28□□□□□ -0.76
PTPN3-201ENST00000262539 RARSP54136 660 aaKnown RBP10.28□□□□□ -0.76
PTPN3-201ENST00000262539 ABTB2Q8N961 1025 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 EXOC6Q8TAG9 804 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 KIAA0232Q92628 1395 aa10.28□□□□□ -0.76
PTPN3-201ENST00000262539 KCNJ4P48050 445 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 FAM161AQ3B820 660 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.76
PTPN3-201ENST00000262539 IRX6P78412 446 aaPredicted RBP10.27□□□□□ -0.76
PTPN3-201ENST00000262539 RAPGEF4Q8WZA2 1011 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.76
PTPN3-201ENST00000262539 NBR1Q14596 966 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 LTKP29376 864 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 TULP4Q9NRJ4 1543 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 CEBPAP49715 358 aaPredicted RBP10.27□□□□□ -0.77
PTPN3-201ENST00000262539 NME9Q86XW9 330 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.77
PTPN3-201ENST00000262539 ARHGEF10O15013 1369 aa10.27□□□□□ -0.77
PTPN3-201ENST00000262539 CDCA7LQ96GN5 454 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 USP6P35125 1406 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
PTPN3-201ENST00000262539 ADGRL3Q9HAR2 1447 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
PTPN3-201ENST00000262539 CCT4P50991 539 aaKnown RBP10.26□□□□□ -0.77
PTPN3-201ENST00000262539 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 CCDC30Q5VVM6 783 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 PTPRCP08575 1304 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 EXOSC9Q06265 439 aaKnown RBP10.25□□□□□ -0.77
PTPN3-201ENST00000262539 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 GOLGA6L22H0YM25 854 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 SULT6B1Q6IMI4 303 aa10.25□□□□□ -0.77
PTPN3-201ENST00000262539 PTMAP06454 111 aaKnown RBP10.24□□□□□ -0.77
PTPN3-201ENST00000262539 MSH6P52701 1360 aa10.24□□□□□ -0.77
PTPN3-201ENST00000262539 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
PTPN3-201ENST00000262539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.774e-6■■■■□ 19.3
PTPN3-201ENST00000262539 ROBO2Q9HCK4 1378 aa10.24□□□□□ -0.77
PTPN3-201ENST00000262539 PREX1Q8TCU6 1659 aa10.24□□□□□ -0.77
PTPN3-201ENST00000262539 IL13P35225 146 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 CPS1P31327 1500 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 DCCP43146 1447 aa10.23□□□□□ -0.77
PTPN3-201ENST00000262539 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 SPG7Q9UQ90 795 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 RRP7AQ9Y3A4 280 aaKnown RBP10.22□□□□□ -0.77
PTPN3-201ENST00000262539 TRIM44Q96DX7 344 aaPredicted RBP10.22□□□□□ -0.77
PTPN3-201ENST00000262539 PTMSP20962 102 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 MSH5O43196 834 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 HDAC1Q13547 482 aaPredicted RBP10.22□□□□□ -0.77
PTPN3-201ENST00000262539 IP6K1Q92551 441 aa10.22□□□□□ -0.77
PTPN3-201ENST00000262539 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
PTPN3-201ENST00000262539 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
PTPN3-201ENST00000262539 DCAF8L1A6NGE4 600 aa10.21□□□□□ -0.77
PTPN3-201ENST00000262539 CHMP4CQ96CF2 233 aa10.21□□□□□ -0.77
PTPN3-201ENST00000262539 TSPYL4Q9UJ04 414 aa10.21□□□□□ -0.78
PTPN3-201ENST00000262539 COG6Q9Y2V7 657 aa10.21□□□□□ -0.78
PTPN3-201ENST00000262539 PDE4AP27815 886 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
PTPN3-201ENST00000262539 MAP3K19Q56UN5 1328 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 NEXNQ0ZGT2 675 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 MROH2AA6NES4 1674 aa10.2□□□□□ -0.78
PTPN3-201ENST00000262539 GOLGA6L6A8MZA4 724 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 IPO9Q96P70 1041 aaKnown RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 TAF7Q15545 349 aaPredicted RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 GNL2Q13823 731 aaKnown RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 CHL1O00533 1208 aa10.19□□□□□ -0.78
PTPN3-201ENST00000262539 EIF4A2Q14240 407 aaKnown RBP10.19□□□□□ -0.78
PTPN3-201ENST00000262539 MCCP23508 829 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 PRR36Q9H6K5 1346 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 PPLO60437 1756 aa10.18□□□□□ -0.78
PTPN3-201ENST00000262539 DNTTIP2Q5QJE6 756 aaKnown RBP10.18□□□□□ -0.78
PTPN3-201ENST00000262539 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
PTPN3-201ENST00000262539 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 SSH1Q8WYL5 1049 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 HMOX1P09601 288 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 NOP58Q9Y2X3 529 aaKnown RBP10.17□□□□□ -0.78
PTPN3-201ENST00000262539 NCAPD2Q15021 1401 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 RGS3P49796 1198 aa10.17□□□□□ -0.78
PTPN3-201ENST00000262539 SRCIN1Q9C0H9 1055 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms