RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 GNL3LQ9NVN8 582 aaKnown RBP16.93■□□□□ 0.3
CUX2-201ENST00000261726 PDCP20941 246 aa16.93■□□□□ 0.3
CUX2-201ENST00000261726 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
CUX2-201ENST00000261726 NEBLO76041 1014 aa16.92■□□□□ 0.3
CUX2-201ENST00000261726 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
CUX2-201ENST00000261726 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
CUX2-201ENST00000261726 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.3
CUX2-201ENST00000261726 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
CUX2-201ENST00000261726 CUL7Q14999 1698 aa16.92■□□□□ 0.3
CUX2-201ENST00000261726 ABTB2Q8N961 1025 aa16.92■□□□□ 0.3
CUX2-201ENST00000261726 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
CUX2-201ENST00000261726 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
CUX2-201ENST00000261726 LUC7LQ9NQ29 371 aaKnown RBP16.91■□□□□ 0.3
CUX2-201ENST00000261726 SOGA3Q5TF21 947 aa16.91■□□□□ 0.3
CUX2-201ENST00000261726 MPHOSPH10O00566 681 aaKnown RBP16.9■□□□□ 0.3
CUX2-201ENST00000261726 TRIM22Q8IYM9 498 aa16.9■□□□□ 0.3
CUX2-201ENST00000261726 PIBF1Q8WXW3 757 aa16.9■□□□□ 0.3
CUX2-201ENST00000261726 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
CUX2-201ENST00000261726 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
CUX2-201ENST00000261726 DACH1Q9UI36 760 aa16.9■□□□□ 0.3
CUX2-201ENST00000261726 GOLGA6L7A0A1B0GV03 622 aa16.9■□□□□ 0.3
CUX2-201ENST00000261726 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
CUX2-201ENST00000261726 SSR1P43307 286 aaKnown RBP16.89■□□□□ 0.29
CUX2-201ENST00000261726 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
CUX2-201ENST00000261726 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
CUX2-201ENST00000261726 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
CUX2-201ENST00000261726 EZRP15311 586 aaKnown RBP16.89■□□□□ 0.29
CUX2-201ENST00000261726 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
CUX2-201ENST00000261726 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
CUX2-201ENST00000261726 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
CUX2-201ENST00000261726 GNAI2P04899 355 aa16.88■□□□□ 0.29
CUX2-201ENST00000261726 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
CUX2-201ENST00000261726 CCDC192P0DO97 292 aa16.88■□□□□ 0.29
CUX2-201ENST00000261726 MTHFSP49914 203 aa16.87■□□□□ 0.29
CUX2-201ENST00000261726 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
CUX2-201ENST00000261726 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
CUX2-201ENST00000261726 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
CUX2-201ENST00000261726 ZSCAN29Q8IWY8 852 aaPredicted RBP16.87■□□□□ 0.29
CUX2-201ENST00000261726 MCM2P49736 904 aa16.87■□□□□ 0.29
CUX2-201ENST00000261726 RABEP1Q15276 862 aa16.87■□□□□ 0.29
CUX2-201ENST00000261726 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
CUX2-201ENST00000261726 MYL6BP14649 208 aa16.87■□□□□ 0.29
CUX2-201ENST00000261726 FKBP4Q02790 459 aaKnown RBP eCLIP16.87■□□□□ 0.29
CUX2-201ENST00000261726 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
CUX2-201ENST00000261726 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
CUX2-201ENST00000261726 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
CUX2-201ENST00000261726 ADAMTS8Q9UP79 889 aa16.86■□□□□ 0.29
CUX2-201ENST00000261726 TAF3Q5VWG9 929 aa16.86■□□□□ 0.29
CUX2-201ENST00000261726 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
CUX2-201ENST00000261726 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 CCDC112Q8NEF3 446 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 WDR70Q9NW82 654 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 ZNF76P36508 570 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
CUX2-201ENST00000261726 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 NOL7Q9UMY1 257 aaKnown RBP16.85■□□□□ 0.29
CUX2-201ENST00000261726 EFCAB5A4FU69 1503 aa16.85■□□□□ 0.29
CUX2-201ENST00000261726 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
CUX2-201ENST00000261726 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
CUX2-201ENST00000261726 CABP4P57796 275 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 NUTM2AQ8IVF1 878 aaPredicted RBP16.84■□□□□ 0.29
CUX2-201ENST00000261726 TXLNBQ8N3L3 684 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 ERLIN1O75477 346 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 USP5P45974 858 aa16.84■□□□□ 0.29
CUX2-201ENST00000261726 HMGN5P82970 282 aaKnown RBP16.84■□□□□ 0.29
CUX2-201ENST00000261726 SMG6Q86US8 1419 aaKnown RBP16.84■□□□□ 0.29
CUX2-201ENST00000261726 FYCO1Q9BQS8 1478 aa16.83■□□□□ 0.29
CUX2-201ENST00000261726 PPM1FP49593 454 aaPredicted RBP16.83■□□□□ 0.29
CUX2-201ENST00000261726 SF3B2Q13435 895 aaKnown RBP16.83■□□□□ 0.29
CUX2-201ENST00000261726 LARP1BQ659C4 914 aaKnown RBP16.83■□□□□ 0.29
CUX2-201ENST00000261726 MPHOSPH8Q99549 860 aa16.83■□□□□ 0.29
CUX2-201ENST00000261726 CBFA2T2O43439 604 aa16.83■□□□□ 0.28
CUX2-201ENST00000261726 EIF3JO75822 258 aaKnown RBP16.83■□□□□ 0.28
CUX2-201ENST00000261726 AAMPQ13685 434 aa16.83■□□□□ 0.28
CUX2-201ENST00000261726 ANKRD1Q15327 319 aa16.83■□□□□ 0.28
CUX2-201ENST00000261726 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
CUX2-201ENST00000261726 CCDC102AQ96A19 550 aa16.83■□□□□ 0.28
CUX2-201ENST00000261726 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
CUX2-201ENST00000261726 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 DESP17661 470 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 KIAA1328Q86T90 577 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 TSR2Q969E8 191 aaKnown RBP16.82■□□□□ 0.28
CUX2-201ENST00000261726 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
CUX2-201ENST00000261726 TDO2P48775 406 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 PTPRGP23470 1445 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 CHMP4BP1P59074 171 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 KRT85P78386 507 aa16.82■□□□□ 0.28
CUX2-201ENST00000261726 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
CUX2-201ENST00000261726 ERICH4A6NGS2 130 aa16.81■□□□□ 0.28
CUX2-201ENST00000261726 SPATA32Q96LK8 384 aa16.81■□□□□ 0.28
CUX2-201ENST00000261726 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
CUX2-201ENST00000261726 CEP57L1Q8IYX8 460 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms