RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 QRICH2Q9H0J4 1663 aa19.7■□□□□ 0.74
LMNB1-201ENST00000261366 R3HCC1Q9Y3T6 440 aaKnown RBP19.7■□□□□ 0.74
LMNB1-201ENST00000261366 ZSCAN30Q86W11 494 aa19.69■□□□□ 0.74
LMNB1-201ENST00000261366 CALD1Q05682 793 aaKnown RBP19.69■□□□□ 0.74
LMNB1-201ENST00000261366 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
LMNB1-201ENST00000261366 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
LMNB1-201ENST00000261366 FAM13BQ9NYF5 915 aa19.69■□□□□ 0.74
LMNB1-201ENST00000261366 IFT172Q9UG01 1749 aa19.68■□□□□ 0.74
LMNB1-201ENST00000261366 CDC45O75419 566 aa19.68■□□□□ 0.74
LMNB1-201ENST00000261366 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
LMNB1-201ENST00000261366 KLHL40Q2TBA0 621 aa19.68■□□□□ 0.74
LMNB1-201ENST00000261366 PRPF40AO75400 957 aaKnown RBP19.67■□□□□ 0.74
LMNB1-201ENST00000261366 OTUD7AQ8TE49 926 aaPredicted RBP19.67■□□□□ 0.74
LMNB1-201ENST00000261366 MLECQ14165 292 aa19.67■□□□□ 0.74
LMNB1-201ENST00000261366 TPRNQ4KMQ1 711 aa19.67■□□□□ 0.74
LMNB1-201ENST00000261366 ZGPATQ8N5A5 531 aaKnown RBP19.67■□□□□ 0.74
LMNB1-201ENST00000261366 GCC1Q96CN9 775 aa19.67■□□□□ 0.74
LMNB1-201ENST00000261366 CAMSAP1Q5T5Y3 1602 aa19.67■□□□□ 0.74
LMNB1-201ENST00000261366 SIGLEC1Q9BZZ2 1709 aa19.66■□□□□ 0.74
LMNB1-201ENST00000261366 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
LMNB1-201ENST00000261366 ZSCAN23Q3MJ62 389 aa19.66■□□□□ 0.74
LMNB1-201ENST00000261366 RBSNQ9H1K0 784 aa19.66■□□□□ 0.74
LMNB1-201ENST00000261366 TPM2P07951 284 aa19.66■□□□□ 0.74
LMNB1-201ENST00000261366 RICTORQ6R327 1708 aa19.65■□□□□ 0.74
LMNB1-201ENST00000261366 ALDH1L2Q3SY69 923 aa19.65■□□□□ 0.74
LMNB1-201ENST00000261366 FOXD4L6Q3SYB3 417 aaPredicted RBP19.65■□□□□ 0.74
LMNB1-201ENST00000261366 FOXD4L3Q6VB84 417 aaPredicted RBP19.65■□□□□ 0.74
LMNB1-201ENST00000261366 VAMP4O75379 141 aa19.65■□□□□ 0.74
LMNB1-201ENST00000261366 SMARCA5O60264 1052 aaPredicted RBP19.64■□□□□ 0.73
LMNB1-201ENST00000261366 PRIM1P49642 420 aaKnown RBP19.64■□□□□ 0.73
LMNB1-201ENST00000261366 MRPL50Q8N5N7 158 aaKnown RBP19.64■□□□□ 0.73
LMNB1-201ENST00000261366 RNF214Q8ND24 703 aa19.64■□□□□ 0.73
LMNB1-201ENST00000261366 PPP1R9BQ96SB3 815 aa19.64■□□□□ 0.73
LMNB1-201ENST00000261366 IL16Q14005 1332 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 DCTN1Q14203 1278 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 MPNDQ8N594 471 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 ADGRB1O14514 1584 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 TULP4Q9NRJ4 1543 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 PTMSP20962 102 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
LMNB1-201ENST00000261366 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
LMNB1-201ENST00000261366 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 PRAM1Q96QH2 718 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 PPLO60437 1756 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 NSD2O96028 1365 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 MYO3AQ8NEV4 1616 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 PLEKHM2Q8IWE5 1019 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 TERF2IPQ9NYB0 399 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
LMNB1-201ENST00000261366 ARHGAP31Q2M1Z3 1444 aa19.61■□□□□ 0.73
LMNB1-201ENST00000261366 C8orf58Q8NAV2 365 aa19.61■□□□□ 0.73
LMNB1-201ENST00000261366 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
LMNB1-201ENST00000261366 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
LMNB1-201ENST00000261366 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
LMNB1-201ENST00000261366 OFD1O75665 1012 aa19.61■□□□□ 0.73
LMNB1-201ENST00000261366 TWISTNBQ3B726 338 aaPredicted RBP19.6■□□□□ 0.73
LMNB1-201ENST00000261366 SYCE3A1L190 88 aa19.59■□□□□ 0.73
LMNB1-201ENST00000261366 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
LMNB1-201ENST00000261366 RABEP1Q15276 862 aa19.59■□□□□ 0.73
LMNB1-201ENST00000261366 PDCL3Q9H2J4 239 aa19.59■□□□□ 0.73
LMNB1-201ENST00000261366 NCBP3Q53F19 620 aaKnown RBP19.58■□□□□ 0.73
LMNB1-201ENST00000261366 GPT2Q8TD30 523 aa19.58■□□□□ 0.73
LMNB1-201ENST00000261366 TSPOAP1O95153 1857 aa19.58■□□□□ 0.73
LMNB1-201ENST00000261366 KRT24Q2M2I5 525 aa19.58■□□□□ 0.72
LMNB1-201ENST00000261366 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.72
LMNB1-201ENST00000261366 NEXMIFQ5QGS0 1516 aa19.58■□□□□ 0.72
LMNB1-201ENST00000261366 GLI2P10070 1586 aa19.58■□□□□ 0.72
LMNB1-201ENST00000261366 EMILIN1Q9Y6C2 1016 aa19.58■□□□□ 0.72
LMNB1-201ENST00000261366 FCHSD2O94868 740 aa19.57■□□□□ 0.72
LMNB1-201ENST00000261366 NUCB2P80303 420 aa19.57■□□□□ 0.72
LMNB1-201ENST00000261366 USP26Q9BXU7 913 aa19.57■□□□□ 0.72
LMNB1-201ENST00000261366 TTC22Q5TAA0 569 aa19.56■□□□□ 0.72
LMNB1-201ENST00000261366 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
LMNB1-201ENST00000261366 PIK3C2BO00750 1634 aa19.56■□□□□ 0.72
LMNB1-201ENST00000261366 NFE2L2Q16236 605 aa19.55■□□□□ 0.72
LMNB1-201ENST00000261366 COL3A1P02461 1466 aaPredicted RBP19.55■□□□□ 0.72
LMNB1-201ENST00000261366 SDSP20132 328 aa19.55■□□□□ 0.72
LMNB1-201ENST00000261366 TSHZ3Q63HK5 1081 aa19.55■□□□□ 0.72
LMNB1-201ENST00000261366 DIP2BQ9P265 1576 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 UQCRHLA0A096LP55 91 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 UQCRHP07919 91 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 ZNF445P59923 1031 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 TMEM63CQ9P1W3 806 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 POLKQ9UBT6 870 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
LMNB1-201ENST00000261366 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.54■□□□□ 0.72
LMNB1-201ENST00000261366 ZC3H13Q5T200 1668 aaKnown RBP19.53■□□□□ 0.72
LMNB1-201ENST00000261366 INTS3Q68E01 1043 aaKnown RBP19.53■□□□□ 0.72
LMNB1-201ENST00000261366 CDK19Q9BWU1 502 aa19.53■□□□□ 0.72
LMNB1-201ENST00000261366 CHMP4BQ9H444 224 aaKnown RBP19.53■□□□□ 0.72
LMNB1-201ENST00000261366 ZDHHC9Q9Y397 364 aa19.53■□□□□ 0.72
LMNB1-201ENST00000261366 GNAI1P63096 354 aa19.53■□□□□ 0.72
LMNB1-201ENST00000261366 ST18O60284 1047 aa19.52■□□□□ 0.72
LMNB1-201ENST00000261366 ABCC4O15439 1325 aa19.52■□□□□ 0.71
LMNB1-201ENST00000261366 PTMAP06454 111 aaKnown RBP19.51■□□□□ 0.71
LMNB1-201ENST00000261366 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms