RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 MST1RQ04912 1400 aa29.24■■■□□ 2.27
SIX3-201ENST00000260653 TRIM35Q9UPQ4 493 aa29.24■■■□□ 2.27
SIX3-201ENST00000260653 FLT4P35916 1363 aa29.24■■■□□ 2.27
SIX3-201ENST00000260653 PHACTR3Q96KR7 559 aa29.23■■■□□ 2.27
SIX3-201ENST00000260653 KIF1AQ12756 1690 aa29.23■■■□□ 2.27
SIX3-201ENST00000260653 RIPK4P57078 832 aa29.22■■■□□ 2.27
SIX3-201ENST00000260653 BCL11AQ9H165 835 aa29.22■■■□□ 2.27
SIX3-201ENST00000260653 XIRP1Q702N8 1843 aaKnown RBP29.21■■■□□ 2.27
SIX3-201ENST00000260653 NEFMP07197 916 aa29.21■■■□□ 2.27
SIX3-201ENST00000260653 PPP4R2Q9NY27 417 aa29.21■■■□□ 2.27
SIX3-201ENST00000260653 AMPHP49418 695 aa29.2■■■□□ 2.27
SIX3-201ENST00000260653 RGPD1P0DJD0 1748 aa29.19■■■□□ 2.26
SIX3-201ENST00000260653 PLIN1O60240 522 aa29.19■■■□□ 2.26
SIX3-201ENST00000260653 AEBP1Q8IUX7 1158 aa29.19■■■□□ 2.26
SIX3-201ENST00000260653 ZNF335Q9H4Z2 1342 aaPredicted RBP29.18■■■□□ 2.26
SIX3-201ENST00000260653 TRPM3Q9HCF6 1732 aaPredicted RBP29.17■■■□□ 2.26
SIX3-201ENST00000260653 MSH6P52701 1360 aa29.17■■■□□ 2.26
SIX3-201ENST00000260653 SULT6B1Q6IMI4 303 aa29.16■■■□□ 2.26
SIX3-201ENST00000260653 CADPS2Q86UW7 1296 aa29.16■■■□□ 2.26
SIX3-201ENST00000260653 NFE2L2Q16236 605 aa29.15■■■□□ 2.26
SIX3-201ENST00000260653 KRT28Q7Z3Y7 464 aa29.15■■■□□ 2.26
SIX3-201ENST00000260653 NFAT5O94916 1531 aa29.15■■■□□ 2.26
SIX3-201ENST00000260653 HOXC9P31274 260 aa29.14■■■□□ 2.26
SIX3-201ENST00000260653 LTN1O94822 1766 aa29.14■■■□□ 2.25
SIX3-201ENST00000260653 KIF24Q5T7B8 1368 aa29.13■■■□□ 2.25
SIX3-201ENST00000260653 MYH16Q9H6N6 1097 aa29.13■■■□□ 2.25
SIX3-201ENST00000260653 LMOD2Q6P5Q4 547 aa29.11■■■□□ 2.25
SIX3-201ENST00000260653 ARHGEF10O15013 1369 aa29.11■■■□□ 2.25
SIX3-201ENST00000260653 DLG5Q8TDM6 1919 aa29.1■■■□□ 2.25
SIX3-201ENST00000260653 DDX17Q92841 729 aaKnown RBP29.1■■■□□ 2.25
SIX3-201ENST00000260653 B4GALNT3Q6L9W6 998 aa29.1■■■□□ 2.25
SIX3-201ENST00000260653 TSR2Q969E8 191 aaKnown RBP29.09■■■□□ 2.25
SIX3-201ENST00000260653 FANCIQ9NVI1 1328 aa29.09■■■□□ 2.25
SIX3-201ENST00000260653 IL16Q14005 1332 aa29.08■■■□□ 2.25
SIX3-201ENST00000260653 PLEKHG5O94827 1062 aa29.08■■■□□ 2.25
SIX3-201ENST00000260653 RTL1A6NKG5 1358 aa29.08■■■□□ 2.25
SIX3-201ENST00000260653 KCNH5Q8NCM2 988 aa29.08■■■□□ 2.24
SIX3-201ENST00000260653 EXOC6Q8TAG9 804 aa29.08■■■□□ 2.24
SIX3-201ENST00000260653 BCAR3O75815 825 aa29.07■■■□□ 2.24
SIX3-201ENST00000260653 EYA1Q99502 592 aa29.07■■■□□ 2.24
SIX3-201ENST00000260653 SLIT3O75094 1523 aa29.06■■■□□ 2.24
SIX3-201ENST00000260653 IGSF1Q8N6C5 1336 aa29.06■■■□□ 2.24
SIX3-201ENST00000260653 ALS2Q96Q42 1657 aa29.05■■■□□ 2.24
SIX3-201ENST00000260653 C20orf194Q5TEA3 1177 aa29.04■■■□□ 2.24
SIX3-201ENST00000260653 THUMPD2Q9BTF0 503 aaKnown RBP29.04■■■□□ 2.24
SIX3-201ENST00000260653 KDRP35968 1356 aa29.04■■■□□ 2.24
SIX3-201ENST00000260653 USP19O94966 1318 aa29.04■■■□□ 2.24
SIX3-201ENST00000260653 GCP02774 474 aa29.03■■■□□ 2.24
SIX3-201ENST00000260653 LTV1Q96GA3 475 aaPredicted RBP29.03■■■□□ 2.24
SIX3-201ENST00000260653 ZBTB7CA1YPR0 619 aa29.02■■■□□ 2.24
SIX3-201ENST00000260653 IP6K1Q92551 441 aa29.02■■■□□ 2.24
SIX3-201ENST00000260653 NPHP3Q7Z494 1330 aa29.01■■■□□ 2.24
SIX3-201ENST00000260653 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.01■■■□□ 2.23
SIX3-201ENST00000260653 PHRF1Q9P1Y6 1649 aaKnown RBP29.01■■■□□ 2.23
SIX3-201ENST00000260653 FAM83GA6ND36 823 aa28.99■■■□□ 2.23
SIX3-201ENST00000260653 RARSP54136 660 aaKnown RBP28.99■■■□□ 2.23
SIX3-201ENST00000260653 LMOD3Q0VAK6 560 aa28.99■■■□□ 2.23
SIX3-201ENST00000260653 CRBNQ96SW2 442 aa28.99■■■□□ 2.23
SIX3-201ENST00000260653 EXOSC9Q06265 439 aaKnown RBP28.98■■■□□ 2.23
SIX3-201ENST00000260653 BRINP3Q76B58 766 aa28.97■■■□□ 2.23
SIX3-201ENST00000260653 PXDNQ92626 1479 aa28.97■■■□□ 2.23
SIX3-201ENST00000260653 ARHGEF25Q86VW2 580 aa28.97■■■□□ 2.23
SIX3-201ENST00000260653 MED1Q15648 1581 aaPredicted RBP28.97■■■□□ 2.23
SIX3-201ENST00000260653 CCDC136Q96JN2 1154 aa28.96■■■□□ 2.23
SIX3-201ENST00000260653 LAS1LQ9Y4W2 734 aaKnown RBP28.96■■■□□ 2.23
SIX3-201ENST00000260653 DCTN1Q14203 1278 aa28.96■■■□□ 2.23
SIX3-201ENST00000260653 CALD1Q05682 793 aaKnown RBP28.95■■■□□ 2.22
SIX3-201ENST00000260653 TNS3Q68CZ2 1445 aa28.94■■■□□ 2.22
SIX3-201ENST00000260653 BCL2L13Q9BXK5 485 aa28.93■■■□□ 2.22
SIX3-201ENST00000260653 SLAIN2Q9P270 581 aa28.93■■■□□ 2.22
SIX3-201ENST00000260653 CT47B1P0C2W7 299 aaPredicted RBP28.92■■■□□ 2.22
SIX3-201ENST00000260653 MTHFSDQ2M296 383 aaKnown RBP28.92■■■□□ 2.22
SIX3-201ENST00000260653 USHBP1Q8N6Y0 703 aa28.92■■■□□ 2.22
SIX3-201ENST00000260653 IFT57Q9NWB7 429 aa28.91■■■□□ 2.22
SIX3-201ENST00000260653 ZNF853P0CG23 659 aa28.9■■■□□ 2.22
SIX3-201ENST00000260653 GNAI1P63096 354 aa28.9■■■□□ 2.22
SIX3-201ENST00000260653 RGPD2P0DJD1 1756 aa28.89■■■□□ 2.22
SIX3-201ENST00000260653 SPATA31A3Q5VYP0 1347 aa28.89■■■□□ 2.21
SIX3-201ENST00000260653 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 MCM10Q7L590 875 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 FRAT1Q92837 279 aaPredicted RBP28.88■■■□□ 2.21
SIX3-201ENST00000260653 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 CANXP27824 592 aaKnown RBP28.88■■■□□ 2.21
SIX3-201ENST00000260653 ZC3H6P61129 1189 aaKnown RBP28.88■■■□□ 2.21
SIX3-201ENST00000260653 MBIPQ9NS73 344 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 CFAP44Q96MT7 982 aa28.87■■■□□ 2.21
SIX3-201ENST00000260653 CABLES1Q8TDN4 633 aa28.86■■■□□ 2.21
SIX3-201ENST00000260653 LRRC59Q96AG4 307 aaKnown RBP28.86■■■□□ 2.21
SIX3-201ENST00000260653 AXIN2Q9Y2T1 843 aa28.86■■■□□ 2.21
SIX3-201ENST00000260653 GAS2L2Q8NHY3 880 aa28.85■■■□□ 2.21
SIX3-201ENST00000260653 RGPD5Q99666 1765 aa28.84■■■□□ 2.21
SIX3-201ENST00000260653 CRYBG1Q9Y4K1 1723 aa28.83■■■□□ 2.21
SIX3-201ENST00000260653 ANKRD24Q8TF21 1146 aa28.83■■■□□ 2.21
SIX3-201ENST00000260653 PDE3AQ14432 1141 aa28.82■■■□□ 2.2
SIX3-201ENST00000260653 SSH1Q8WYL5 1049 aa28.82■■■□□ 2.2
SIX3-201ENST00000260653 SMC4Q9NTJ3 1288 aa28.82■■■□□ 2.2
SIX3-201ENST00000260653 PANK1Q8TE04 598 aa28.8■■■□□ 2.2
SIX3-201ENST00000260653 SOS2Q07890 1332 aaPredicted RBP28.8■■■□□ 2.2
SIX3-201ENST00000260653 RTF1Q92541 710 aaKnown RBP28.8■■■□□ 2.2
SIX3-201ENST00000260653 TSPYL6Q8N831 410 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms