RNA–Protein interactions for RNA: ENST00000259467.8

PDCL-201, Transcript of phosducin like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL, Length 2,813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL-201ENST00000259467 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.38
PDCL-201ENST00000259467 HDGFL2Q7Z4V5 671 aaPredicted RBP12.69□□□□□ -0.38
PDCL-201ENST00000259467 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
PDCL-201ENST00000259467 MSH6P52701 1360 aa12.68□□□□□ -0.38
PDCL-201ENST00000259467 SOX12O15370 315 aa12.68□□□□□ -0.38
PDCL-201ENST00000259467 AATKQ6ZMQ8 1374 aa12.68□□□□□ -0.38
PDCL-201ENST00000259467 LTBP4Q8N2S1 1624 aa12.67□□□□□ -0.38
PDCL-201ENST00000259467 NME9Q86XW9 330 aa12.67□□□□□ -0.38
PDCL-201ENST00000259467 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
PDCL-201ENST00000259467 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
PDCL-201ENST00000259467 DLG5Q8TDM6 1919 aa12.67□□□□□ -0.38
PDCL-201ENST00000259467 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
PDCL-201ENST00000259467 RLBP1P12271 317 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 FMN2Q9NZ56 1722 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 PIP4K2BP78356 416 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 MST1RQ04912 1400 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
PDCL-201ENST00000259467 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
PDCL-201ENST00000259467 FCHSD2O94868 740 aa12.65□□□□□ -0.38
PDCL-201ENST00000259467 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
PDCL-201ENST00000259467 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
PDCL-201ENST00000259467 PNNQ9H307 717 aaKnown RBP12.65□□□□□ -0.38
PDCL-201ENST00000259467 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
PDCL-201ENST00000259467 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
PDCL-201ENST00000259467 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
PDCL-201ENST00000259467 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
PDCL-201ENST00000259467 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
PDCL-201ENST00000259467 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
PDCL-201ENST00000259467 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
PDCL-201ENST00000259467 PSME1Q06323 249 aa12.63□□□□□ -0.39
PDCL-201ENST00000259467 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
PDCL-201ENST00000259467 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
PDCL-201ENST00000259467 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
PDCL-201ENST00000259467 MVPQ14764 893 aaKnown RBP12.62□□□□□ -0.39
PDCL-201ENST00000259467 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
PDCL-201ENST00000259467 USP19O94966 1318 aa12.61□□□□□ -0.39
PDCL-201ENST00000259467 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
PDCL-201ENST00000259467 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
PDCL-201ENST00000259467 NPM2Q86SE8 214 aaKnown RBP12.61□□□□□ -0.39
PDCL-201ENST00000259467 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
PDCL-201ENST00000259467 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
PDCL-201ENST00000259467 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
PDCL-201ENST00000259467 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
PDCL-201ENST00000259467 EXOSC9Q06265 439 aaKnown RBP12.6□□□□□ -0.39
PDCL-201ENST00000259467 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
PDCL-201ENST00000259467 USP6P35125 1406 aa12.6□□□□□ -0.39
PDCL-201ENST00000259467 UBAP1LF5GYI3 381 aa12.6□□□□□ -0.39
PDCL-201ENST00000259467 IL13P35225 146 aa12.6□□□□□ -0.39
PDCL-201ENST00000259467 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
PDCL-201ENST00000259467 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
PDCL-201ENST00000259467 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
PDCL-201ENST00000259467 NEFMP07197 916 aa12.59□□□□□ -0.39
PDCL-201ENST00000259467 RIPK4P57078 832 aa12.59□□□□□ -0.39
PDCL-201ENST00000259467 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
PDCL-201ENST00000259467 DZIP1LQ8IYY4 767 aaKnown RBP12.59□□□□□ -0.39
PDCL-201ENST00000259467 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
PDCL-201ENST00000259467 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
PDCL-201ENST00000259467 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
PDCL-201ENST00000259467 NCOA3Q9Y6Q9 1424 aa12.58□□□□□ -0.4
PDCL-201ENST00000259467 RRS1Q15050 365 aaKnown RBP12.58□□□□□ -0.4
PDCL-201ENST00000259467 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
PDCL-201ENST00000259467 TRIM27P14373 513 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 RGS3P49796 1198 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 NLRP6P59044 892 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
PDCL-201ENST00000259467 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 CERKQ8TCT0 537 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 DCCP43146 1447 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 ATF7IPQ6VMQ6 1270 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
PDCL-201ENST00000259467 RWDD1Q9H446 243 aaPredicted RBP12.57□□□□□ -0.4
PDCL-201ENST00000259467 USP54Q70EL1 1684 aa12.56□□□□□ -0.4
PDCL-201ENST00000259467 OVOS2A0A0J9YW53 1432 aa12.56□□□□□ -0.4
PDCL-201ENST00000259467 OVOS2Q6IE36 1432 aa12.56□□□□□ -0.4
PDCL-201ENST00000259467 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
PDCL-201ENST00000259467 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
PDCL-201ENST00000259467 KIF16BQ96L93 1317 aa12.55□□□□□ -0.4
PDCL-201ENST00000259467 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
PDCL-201ENST00000259467 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
PDCL-201ENST00000259467 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
PDCL-201ENST00000259467 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
PDCL-201ENST00000259467 COG3Q96JB2 828 aa12.54□□□□□ -0.4
PDCL-201ENST00000259467 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
PDCL-201ENST00000259467 USP31Q70CQ4 1352 aa12.53□□□□□ -0.4
PDCL-201ENST00000259467 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
PDCL-201ENST00000259467 SMC5Q8IY18 1101 aa12.53□□□□□ -0.4
PDCL-201ENST00000259467 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
PDCL-201ENST00000259467 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
PDCL-201ENST00000259467 LAS1LQ9Y4W2 734 aaKnown RBP12.53□□□□□ -0.4
PDCL-201ENST00000259467 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
PDCL-201ENST00000259467 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.4
PDCL-201ENST00000259467 MARF1Q9Y4F3 1742 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms