RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
THSD1-201ENST00000258613 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
THSD1-201ENST00000258613 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
THSD1-201ENST00000258613 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
THSD1-201ENST00000258613 MVPQ14764 893 aaKnown RBP16.8■□□□□ 0.28
THSD1-201ENST00000258613 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
THSD1-201ENST00000258613 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
THSD1-201ENST00000258613 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
THSD1-201ENST00000258613 SEC24BO95487 1268 aa16.79■□□□□ 0.28
THSD1-201ENST00000258613 MCM10Q7L590 875 aa16.78■□□□□ 0.28
THSD1-201ENST00000258613 FER1L4A9Z1Z3 1794 aa16.78■□□□□ 0.28
THSD1-201ENST00000258613 KNDC1Q76NI1 1749 aa16.78■□□□□ 0.28
THSD1-201ENST00000258613 FAM161AQ3B820 660 aa16.78■□□□□ 0.28
THSD1-201ENST00000258613 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
THSD1-201ENST00000258613 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
THSD1-201ENST00000258613 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
THSD1-201ENST00000258613 PLEKHG3A1L390 1219 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 FOXO3O43524 673 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 TBX22Q9Y458 520 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 ITSN1Q15811 1721 aa16.77■□□□□ 0.28
THSD1-201ENST00000258613 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
THSD1-201ENST00000258613 USP6P35125 1406 aa16.76■□□□□ 0.27
THSD1-201ENST00000258613 C1orf115Q9H7X2 142 aa16.76■□□□□ 0.27
THSD1-201ENST00000258613 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
THSD1-201ENST00000258613 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
THSD1-201ENST00000258613 VAMP4O75379 141 aa16.75■□□□□ 0.27
THSD1-201ENST00000258613 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
THSD1-201ENST00000258613 IL16Q14005 1332 aa16.75■□□□□ 0.27
THSD1-201ENST00000258613 MAP3K19Q56UN5 1328 aa16.75■□□□□ 0.27
THSD1-201ENST00000258613 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
THSD1-201ENST00000258613 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
THSD1-201ENST00000258613 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
THSD1-201ENST00000258613 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
THSD1-201ENST00000258613 NLRP6P59044 892 aa16.73■□□□□ 0.27
THSD1-201ENST00000258613 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
THSD1-201ENST00000258613 ZBTB7CA1YPR0 619 aa16.71■□□□□ 0.27
THSD1-201ENST00000258613 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
THSD1-201ENST00000258613 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.27
THSD1-201ENST00000258613 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.27
THSD1-201ENST00000258613 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.26
THSD1-201ENST00000258613 CT47B1P0C2W7 299 aaPredicted RBP16.7■□□□□ 0.26
THSD1-201ENST00000258613 AMPHP49418 695 aa16.7■□□□□ 0.26
THSD1-201ENST00000258613 GNAI1P63096 354 aa16.7■□□□□ 0.26
THSD1-201ENST00000258613 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
THSD1-201ENST00000258613 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
THSD1-201ENST00000258613 SLIT1O75093 1534 aa16.7■□□□□ 0.26
THSD1-201ENST00000258613 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
THSD1-201ENST00000258613 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
THSD1-201ENST00000258613 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
THSD1-201ENST00000258613 MRPL50Q8N5N7 158 aaKnown RBP16.69■□□□□ 0.26
THSD1-201ENST00000258613 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
THSD1-201ENST00000258613 ABTB2Q8N961 1025 aa16.68■□□□□ 0.26
THSD1-201ENST00000258613 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
THSD1-201ENST00000258613 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
THSD1-201ENST00000258613 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
THSD1-201ENST00000258613 DIP2AQ14689 1571 aa16.68■□□□□ 0.26
THSD1-201ENST00000258613 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
THSD1-201ENST00000258613 EYA1Q99502 592 aa16.67■□□□□ 0.26
THSD1-201ENST00000258613 RIMS1Q86UR5 1692 aaKnown RBP16.67■□□□□ 0.26
THSD1-201ENST00000258613 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
THSD1-201ENST00000258613 SSH2Q76I76 1423 aa16.67■□□□□ 0.26
THSD1-201ENST00000258613 TOPAZ1Q8N9V7 1692 aa16.66■□□□□ 0.26
THSD1-201ENST00000258613 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
THSD1-201ENST00000258613 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
THSD1-201ENST00000258613 IPO8O15397 1037 aaKnown RBP16.66■□□□□ 0.26
THSD1-201ENST00000258613 ALDH1L2Q3SY69 923 aa16.65■□□□□ 0.26
THSD1-201ENST00000258613 USP19O94966 1318 aa16.65■□□□□ 0.26
THSD1-201ENST00000258613 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
THSD1-201ENST00000258613 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
THSD1-201ENST00000258613 ESCO1Q5FWF5 840 aa16.63■□□□□ 0.25
THSD1-201ENST00000258613 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
THSD1-201ENST00000258613 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
THSD1-201ENST00000258613 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.62■□□□□ 0.25
THSD1-201ENST00000258613 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
THSD1-201ENST00000258613 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
THSD1-201ENST00000258613 ZBTB7BO15156 539 aaPredicted RBP16.62■□□□□ 0.25
THSD1-201ENST00000258613 CALD1Q05682 793 aaKnown RBP16.62■□□□□ 0.25
THSD1-201ENST00000258613 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
THSD1-201ENST00000258613 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
THSD1-201ENST00000258613 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
THSD1-201ENST00000258613 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
THSD1-201ENST00000258613 PHF8Q9UPP1 1060 aa16.6■□□□□ 0.25
THSD1-201ENST00000258613 CHL1O00533 1208 aa16.59■□□□□ 0.25
THSD1-201ENST00000258613 HOXC9P31274 260 aa16.59■□□□□ 0.25
THSD1-201ENST00000258613 SIRT2Q8IXJ6 389 aa16.59■□□□□ 0.25
THSD1-201ENST00000258613 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
THSD1-201ENST00000258613 FLT4P35916 1363 aa16.59■□□□□ 0.25
THSD1-201ENST00000258613 HDAC1Q13547 482 aaPredicted RBP16.59■□□□□ 0.25
THSD1-201ENST00000258613 G2E3Q7L622 706 aa16.58■□□□□ 0.24
THSD1-201ENST00000258613 XRN1Q8IZH2 1706 aaKnown RBP16.58■□□□□ 0.24
THSD1-201ENST00000258613 AAMPQ13685 434 aa16.57■□□□□ 0.24
THSD1-201ENST00000258613 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
THSD1-201ENST00000258613 F6X3S4 739 aa16.57■□□□□ 0.24
THSD1-201ENST00000258613 PSME1Q06323 249 aa16.57■□□□□ 0.24
THSD1-201ENST00000258613 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
THSD1-201ENST00000258613 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
THSD1-201ENST00000258613 DAXXQ9UER7 740 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms