RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 FAM69CQ0P6D2 419 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 ANTXR1Q9H6X2 564 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 VAMP4O75379 141 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 HDGFP51858 240 aaKnown RBP5.82□□□□□ -1.48
USP44-201ENST00000258499 TSHZ3Q63HK5 1081 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 NSD2O96028 1365 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 EIF2S2P20042 333 aaKnown RBP5.82□□□□□ -1.48
USP44-201ENST00000258499 NUCB2P80303 420 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 RABEP1Q15276 862 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 MPNDQ8N594 471 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 EXOC6BQ9Y2D4 811 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 SYNMO15061 1565 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 ATP7AQ04656 1500 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 AEBP1Q8IUX7 1158 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 GAS2L2Q8NHY3 880 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 NUDT16Q96DE0 195 aaKnown RBP5.82□□□□□ -1.48
USP44-201ENST00000258499 CIZ1Q9ULV3 898 aaPredicted RBP5.82□□□□□ -1.48
USP44-201ENST00000258499 CDC42BPBQ9Y5S2 1711 aa5.82□□□□□ -1.48
USP44-201ENST00000258499 IL16Q14005 1332 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 VSIG10Q8N0Z9 540 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 ZNF428Q96B54 188 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 NPATQ14207 1427 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 ZBTB7BO15156 539 aaPredicted RBP5.81□□□□□ -1.48
USP44-201ENST00000258499 KIAA1211Q6ZU35 1233 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 MRPL50Q8N5N7 158 aaKnown RBP5.81□□□□□ -1.48
USP44-201ENST00000258499 TRPM2O94759 1503 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 OTUD7AQ8TE49 926 aaPredicted RBP5.81□□□□□ -1.48
USP44-201ENST00000258499 CCDC61Q9Y6R9 512 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 IQGAP3Q86VI3 1631 aa5.81□□□□□ -1.48
USP44-201ENST00000258499 PLEKHF1Q96S99 279 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 MEIS3Q99687 375 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 TAOK2Q9UL54 1235 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 UPF3BQ9BZI7 483 aaKnown RBP5.8□□□□□ -1.48
USP44-201ENST00000258499 ABCC1P33527 1531 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 MYO5CQ9NQX4 1742 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 SBNO2Q9Y2G9 1366 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 UNC13BO14795 1591 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 CD2BP2O95400 341 aaKnown RBP5.8□□□□□ -1.48
USP44-201ENST00000258499 BAG4O95429 457 aaKnown RBP5.8□□□□□ -1.48
USP44-201ENST00000258499 MAP4K4O95819 1239 aaPredicted RBP5.8□□□□□ -1.48
USP44-201ENST00000258499 SLC26A8Q96RN1 970 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 IL1RAPL2Q9NP60 686 aa5.8□□□□□ -1.48
USP44-201ENST00000258499 KDM5AP29375 1690 aaKnown RBP5.8□□□□□ -1.48
USP44-201ENST00000258499 ZNF518AQ6AHZ1 1483 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 FAM13BQ9NYF5 915 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 CLTCL1P53675 1640 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 WASLO00401 505 aaPredicted RBP5.79□□□□□ -1.48
USP44-201ENST00000258499 ERC2O15083 957 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 CHMP3Q9Y3E7 222 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 R3HCC1Q9Y3T6 440 aaKnown RBP5.79□□□□□ -1.48
USP44-201ENST00000258499 SDSP20132 328 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 RBM25P49756 843 aaKnown RBP5.79□□□□□ -1.48
USP44-201ENST00000258499 HSP90AB2PQ58FF8 381 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 RPAP2Q8IXW5 612 aaPredicted RBP5.79□□□□□ -1.48
USP44-201ENST00000258499 SNX21Q969T3 373 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 RBM27Q9P2N5 1060 aaKnown RBP5.79□□□□□ -1.48
USP44-201ENST00000258499 MADDQ8WXG6 1647 aa5.79□□□□□ -1.48
USP44-201ENST00000258499 NLRP6P59044 892 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 RAB3GAP1Q15042 981 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 ZGPATQ8N5A5 531 aaKnown RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 SYCE3A1L190 88 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 GNAI2P04899 355 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 RBM10P98175 930 aaKnown RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 TTC22Q5TAA0 569 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 PLEKHM2Q8IWE5 1019 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 SYAP1Q96A49 352 aaPredicted RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 PLXNC1O60486 1568 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 E9PCH4 1651 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 CCDC173Q0VFZ6 552 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 GAS2L3Q86XJ1 694 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 ARHGAP45Q92619 1136 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 PUS7Q96PZ0 661 aaKnown RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 LARP6Q9BRS8 491 aaKnown RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 GDPD2Q9HCC8 539 aa5.78□□□□□ -1.48
USP44-201ENST00000258499 NAP1L2Q9ULW6 460 aaPredicted RBP5.78□□□□□ -1.48
USP44-201ENST00000258499 GOLGA6L4A6NEF3 574 aa5.77□□□□□ -1.48
USP44-201ENST00000258499 UBTFL1P0CB47 393 aaPredicted RBP5.77□□□□□ -1.48
USP44-201ENST00000258499 FGD1P98174 961 aa5.77□□□□□ -1.48
USP44-201ENST00000258499 CHAMP1Q96JM3 812 aa5.77□□□□□ -1.48
USP44-201ENST00000258499 ISY1Q9ULR0 285 aaKnown RBP5.77□□□□□ -1.48
USP44-201ENST00000258499 ZFYVE16Q7Z3T8 1539 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 FOXO3O43524 673 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 CLCN1P35523 988 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 LRRCC1Q9C099 1032 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 CCDC9Q9Y3X0 531 aaKnown RBP5.77□□□□□ -1.49
USP44-201ENST00000258499 MYOM2P54296 1465 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 GSPT1P15170 499 aaKnown RBP5.77□□□□□ -1.49
USP44-201ENST00000258499 KIAA2012Q0VF49 1180 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 PKP1Q13835 747 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 NUTM1Q86Y26 1132 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 SIRT2Q8IXJ6 389 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 ANKRD44Q8N8A2 993 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 ZNF692Q9BU19 519 aaPredicted RBP5.77□□□□□ -1.49
USP44-201ENST00000258499 DCTPP1Q9H773 170 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 EID1Q9Y6B2 187 aa5.77□□□□□ -1.49
USP44-201ENST00000258499 GNAI3P08754 354 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 IL13P35225 146 aa5.76□□□□□ -1.49
USP44-201ENST00000258499 EIF4A2Q14240 407 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms