RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 MBIPQ9NS73 344 aa18.61■□□□□ 0.57
TRAFD1-201ENST00000257604 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
TRAFD1-201ENST00000257604 PTPRUQ92729 1446 aa18.61■□□□□ 0.57
TRAFD1-201ENST00000257604 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
TRAFD1-201ENST00000257604 APBB1O00213 710 aa18.61■□□□□ 0.57
TRAFD1-201ENST00000257604 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
TRAFD1-201ENST00000257604 NLRP1Q9C000 1473 aa18.6■□□□□ 0.57
TRAFD1-201ENST00000257604 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
TRAFD1-201ENST00000257604 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
TRAFD1-201ENST00000257604 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
TRAFD1-201ENST00000257604 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
TRAFD1-201ENST00000257604 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
TRAFD1-201ENST00000257604 TBX22Q9Y458 520 aa18.58■□□□□ 0.57
TRAFD1-201ENST00000257604 PSME1Q06323 249 aa18.58■□□□□ 0.57
TRAFD1-201ENST00000257604 TWISTNBQ3B726 338 aaPredicted RBP18.58■□□□□ 0.57
TRAFD1-201ENST00000257604 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.57
TRAFD1-201ENST00000257604 PLEKHG1Q9ULL1 1385 aa18.57■□□□□ 0.56
TRAFD1-201ENST00000257604 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
TRAFD1-201ENST00000257604 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
TRAFD1-201ENST00000257604 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
TRAFD1-201ENST00000257604 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
TRAFD1-201ENST00000257604 IQSEC2Q5JU85 1478 aa18.55■□□□□ 0.56
TRAFD1-201ENST00000257604 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
TRAFD1-201ENST00000257604 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
TRAFD1-201ENST00000257604 GNAI1P63096 354 aa18.55■□□□□ 0.56
TRAFD1-201ENST00000257604 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
TRAFD1-201ENST00000257604 ATP7BP35670 1465 aa18.54■□□□□ 0.56
TRAFD1-201ENST00000257604 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
TRAFD1-201ENST00000257604 SLC4A10Q6U841 1118 aa18.54■□□□□ 0.56
TRAFD1-201ENST00000257604 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
TRAFD1-201ENST00000257604 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
TRAFD1-201ENST00000257604 NRXN3Q9Y4C0 1643 aa18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 GSE1Q14687 1217 aa18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 SEC24BO95487 1268 aa18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 LNPKQ9C0E8 428 aa18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 PNPLA6Q8IY17 1366 aa18.53■□□□□ 0.56
TRAFD1-201ENST00000257604 PLEKHG3A1L390 1219 aa18.52■□□□□ 0.56
TRAFD1-201ENST00000257604 DDX17Q92841 729 aaKnown RBP18.52■□□□□ 0.56
TRAFD1-201ENST00000257604 VAMP4O75379 141 aa18.52■□□□□ 0.55
TRAFD1-201ENST00000257604 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
TRAFD1-201ENST00000257604 FAM135BQ49AJ0 1406 aa18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 LRRC7Q96NW7 1537 aa18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 C8orf34Q49A92 452 aa18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 SPRYD3Q8NCJ5 442 aa18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 SETD1BQ9UPS6 1966 aaKnown RBP18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 EYA1Q99502 592 aa18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
TRAFD1-201ENST00000257604 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
TRAFD1-201ENST00000257604 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
TRAFD1-201ENST00000257604 HSPA2P54652 639 aa18.5■□□□□ 0.55
TRAFD1-201ENST00000257604 PROSER2Q86WR7 435 aaPredicted RBP18.49■□□□□ 0.55
TRAFD1-201ENST00000257604 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
TRAFD1-201ENST00000257604 CALD1Q05682 793 aaKnown RBP18.49■□□□□ 0.55
TRAFD1-201ENST00000257604 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
TRAFD1-201ENST00000257604 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
TRAFD1-201ENST00000257604 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
TRAFD1-201ENST00000257604 USP6P35125 1406 aa18.48■□□□□ 0.55
TRAFD1-201ENST00000257604 LMOD3Q0VAK6 560 aa18.48■□□□□ 0.55
TRAFD1-201ENST00000257604 UBR1Q8IWV7 1749 aa18.48■□□□□ 0.55
TRAFD1-201ENST00000257604 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
TRAFD1-201ENST00000257604 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
TRAFD1-201ENST00000257604 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
TRAFD1-201ENST00000257604 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
TRAFD1-201ENST00000257604 IFT57Q9NWB7 429 aa18.46■□□□□ 0.55
TRAFD1-201ENST00000257604 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
TRAFD1-201ENST00000257604 F6X3S4 739 aa18.46■□□□□ 0.55
TRAFD1-201ENST00000257604 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
TRAFD1-201ENST00000257604 MFAP1P55081 439 aaKnown RBP18.45■□□□□ 0.54
TRAFD1-201ENST00000257604 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
TRAFD1-201ENST00000257604 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.45■□□□□ 0.54
TRAFD1-201ENST00000257604 MRPL50Q8N5N7 158 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-201ENST00000257604 IL16Q14005 1332 aa18.44■□□□□ 0.54
TRAFD1-201ENST00000257604 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
TRAFD1-201ENST00000257604 MED14O60244 1454 aa18.42■□□□□ 0.54
TRAFD1-201ENST00000257604 TECPR2O15040 1411 aa18.42■□□□□ 0.54
TRAFD1-201ENST00000257604 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
TRAFD1-201ENST00000257604 C3P01024 1663 aa18.41■□□□□ 0.54
TRAFD1-201ENST00000257604 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
TRAFD1-201ENST00000257604 HOXC9P31274 260 aa18.41■□□□□ 0.54
TRAFD1-201ENST00000257604 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
TRAFD1-201ENST00000257604 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
TRAFD1-201ENST00000257604 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
TRAFD1-201ENST00000257604 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
TRAFD1-201ENST00000257604 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
TRAFD1-201ENST00000257604 G2E3Q7L622 706 aa18.39■□□□□ 0.53
TRAFD1-201ENST00000257604 FER1L4A9Z1Z3 1794 aa18.39■□□□□ 0.53
TRAFD1-201ENST00000257604 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
TRAFD1-201ENST00000257604 ALDH1L2Q3SY69 923 aa18.38■□□□□ 0.53
TRAFD1-201ENST00000257604 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
TRAFD1-201ENST00000257604 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
TRAFD1-201ENST00000257604 FLT4P35916 1363 aa18.37■□□□□ 0.53
TRAFD1-201ENST00000257604 ANXA1P04083 346 aa18.37■□□□□ 0.53
TRAFD1-201ENST00000257604 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
TRAFD1-201ENST00000257604 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
TRAFD1-201ENST00000257604 FKBP5Q13451 457 aaPredicted RBP18.36■□□□□ 0.53
TRAFD1-201ENST00000257604 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
TRAFD1-201ENST00000257604 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
TRAFD1-201ENST00000257604 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms