RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 SRPK2P78362 688 aaKnown RBP14.95□□□□□ -0.02
CCNA1-201ENST00000255465 PMFBP1Q8TBY8 1022 aa14.95□□□□□ -0.02
CCNA1-201ENST00000255465 CCDC94Q9BW85 323 aaPredicted RBP14.95□□□□□ -0.02
CCNA1-201ENST00000255465 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
CCNA1-201ENST00000255465 PXDNQ92626 1479 aa14.95□□□□□ -0.02
CCNA1-201ENST00000255465 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
CCNA1-201ENST00000255465 ZHX1Q9UKY1 873 aaPredicted RBP14.95□□□□□ -0.02
CCNA1-201ENST00000255465 ZSCAN20P17040 1043 aaPredicted RBP14.94□□□□□ -0.02
CCNA1-201ENST00000255465 JCADQ9P266 1359 aa14.94□□□□□ -0.02
CCNA1-201ENST00000255465 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
CCNA1-201ENST00000255465 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
CCNA1-201ENST00000255465 ZNF830Q96NB3 372 aaPredicted RBP14.93□□□□□ -0.02
CCNA1-201ENST00000255465 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
CCNA1-201ENST00000255465 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
CCNA1-201ENST00000255465 TESK2Q96S53 571 aa14.93□□□□□ -0.02
CCNA1-201ENST00000255465 BECN1Q14457 450 aa14.92□□□□□ -0.02
CCNA1-201ENST00000255465 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
CCNA1-201ENST00000255465 MRS2Q9HD23 443 aa14.92□□□□□ -0.02
CCNA1-201ENST00000255465 KRT28Q7Z3Y7 464 aa14.91□□□□□ -0.02
CCNA1-201ENST00000255465 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
CCNA1-201ENST00000255465 PSME1Q06323 249 aa14.91□□□□□ -0.02
CCNA1-201ENST00000255465 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
CCNA1-201ENST00000255465 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
CCNA1-201ENST00000255465 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
CCNA1-201ENST00000255465 PLEKHG3A1L390 1219 aa14.89□□□□□ -0.03
CCNA1-201ENST00000255465 CDK11BP21127 795 aaKnown RBP14.89□□□□□ -0.03
CCNA1-201ENST00000255465 HS1BP3Q53T59 392 aa14.89□□□□□ -0.03
CCNA1-201ENST00000255465 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
CCNA1-201ENST00000255465 PNPLA6Q8IY17 1366 aa14.89□□□□□ -0.03
CCNA1-201ENST00000255465 IRX3P78415 501 aaPredicted RBP14.89□□□□□ -0.03
CCNA1-201ENST00000255465 SECISBP2LQ93073 1101 aaKnown RBP14.89□□□□□ -0.03
CCNA1-201ENST00000255465 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
CCNA1-201ENST00000255465 ACEP12821 1306 aa14.88□□□□□ -0.03
CCNA1-201ENST00000255465 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
CCNA1-201ENST00000255465 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
CCNA1-201ENST00000255465 ZSCAN30Q86W11 494 aa14.88□□□□□ -0.03
CCNA1-201ENST00000255465 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
CCNA1-201ENST00000255465 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
CCNA1-201ENST00000255465 COL22A1Q8NFW1 1626 aaPredicted RBP14.88□□□□□ -0.03
CCNA1-201ENST00000255465 ATAD2Q6PL18 1390 aa14.87□□□□□ -0.03
CCNA1-201ENST00000255465 SPATA31A6Q5VVP1 1343 aa14.87□□□□□ -0.03
CCNA1-201ENST00000255465 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
CCNA1-201ENST00000255465 AKAP12Q02952 1782 aa14.87□□□□□ -0.03
CCNA1-201ENST00000255465 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
CCNA1-201ENST00000255465 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
CCNA1-201ENST00000255465 ALS2Q96Q42 1657 aa14.87□□□□□ -0.03
CCNA1-201ENST00000255465 MMP14P50281 582 aa14.86□□□□□ -0.03
CCNA1-201ENST00000255465 EIF4G2P78344 907 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCNA1-201ENST00000255465 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
CCNA1-201ENST00000255465 RGS22Q8NE09 1264 aa14.86□□□□□ -0.03
CCNA1-201ENST00000255465 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
CCNA1-201ENST00000255465 CSPP1Q1MSJ5 1256 aa14.86□□□□□ -0.03
CCNA1-201ENST00000255465 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
CCNA1-201ENST00000255465 TMF1P82094 1093 aa14.85□□□□□ -0.03
CCNA1-201ENST00000255465 PUS7Q96PZ0 661 aaKnown RBP14.85□□□□□ -0.03
CCNA1-201ENST00000255465 FAM13BQ9NYF5 915 aa14.85□□□□□ -0.03
CCNA1-201ENST00000255465 CLGNO14967 610 aa14.84□□□□□ -0.03
CCNA1-201ENST00000255465 HSPA5P11021 654 aaKnown RBP14.84□□□□□ -0.03
CCNA1-201ENST00000255465 SLC4A3P48751 1232 aa14.84□□□□□ -0.03
CCNA1-201ENST00000255465 CCDC173Q0VFZ6 552 aa14.84□□□□□ -0.03
CCNA1-201ENST00000255465 LRP6O75581 1613 aa14.84□□□□□ -0.03
CCNA1-201ENST00000255465 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
CCNA1-201ENST00000255465 PPP1R9BQ96SB3 815 aa14.84□□□□□ -0.03
CCNA1-201ENST00000255465 DNAJC2Q99543 621 aaKnown RBP14.84□□□□□ -0.03
CCNA1-201ENST00000255465 PANK2Q9BZ23 570 aa14.84□□□□□ -0.03
CCNA1-201ENST00000255465 NUTM2BA6NNL0 878 aaPredicted RBP14.83□□□□□ -0.04
CCNA1-201ENST00000255465 NUTM2EB1AL46 878 aaPredicted RBP14.83□□□□□ -0.04
CCNA1-201ENST00000255465 AXDND1Q5T1B0 1012 aaPredicted RBP14.83□□□□□ -0.04
CCNA1-201ENST00000255465 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
CCNA1-201ENST00000255465 NUTM2AQ8IVF1 878 aaPredicted RBP14.83□□□□□ -0.04
CCNA1-201ENST00000255465 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CCNA1-201ENST00000255465 PTMSP20962 102 aa14.82□□□□□ -0.04
CCNA1-201ENST00000255465 LMOD2Q6P5Q4 547 aa14.82□□□□□ -0.04
CCNA1-201ENST00000255465 EXOC6Q8TAG9 804 aa14.82□□□□□ -0.04
CCNA1-201ENST00000255465 MON2Q7Z3U7 1717 aa14.82□□□□□ -0.04
CCNA1-201ENST00000255465 MARF1Q9Y4F3 1742 aaKnown RBP14.82□□□□□ -0.04
CCNA1-201ENST00000255465 ABCA3Q99758 1704 aa14.81□□□□□ -0.04
CCNA1-201ENST00000255465 ARHGEF10O15013 1369 aa14.81□□□□□ -0.04
CCNA1-201ENST00000255465 ZNF500O60304 480 aaPredicted RBP14.81□□□□□ -0.04
CCNA1-201ENST00000255465 DNTTIP2Q5QJE6 756 aaKnown RBP14.81□□□□□ -0.04
CCNA1-201ENST00000255465 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
CCNA1-201ENST00000255465 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
CCNA1-201ENST00000255465 USP6P35125 1406 aa14.81□□□□□ -0.04
CCNA1-201ENST00000255465 PDE3BQ13370 1112 aa14.8□□□□□ -0.04
CCNA1-201ENST00000255465 CCDC184Q52MB2 194 aa14.8□□□□□ -0.04
CCNA1-201ENST00000255465 CPSF1Q10570 1443 aaKnown RBP14.8□□□□□ -0.04
CCNA1-201ENST00000255465 MSNP26038 577 aaKnown RBP14.8□□□□□ -0.04
CCNA1-201ENST00000255465 MCM5P33992 734 aa14.8□□□□□ -0.04
CCNA1-201ENST00000255465 CDCA8Q53HL2 280 aa14.8□□□□□ -0.04
CCNA1-201ENST00000255465 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
CCNA1-201ENST00000255465 ANTXR1Q9H6X2 564 aa14.8□□□□□ -0.04
CCNA1-201ENST00000255465 CRYBG1Q9Y4K1 1723 aa14.8□□□□□ -0.04
CCNA1-201ENST00000255465 CD163L1Q9NR16 1453 aa14.79□□□□□ -0.04
CCNA1-201ENST00000255465 C8orf34Q49A92 452 aa14.79□□□□□ -0.04
CCNA1-201ENST00000255465 CENPQQ7L2Z9 268 aaPredicted RBP14.79□□□□□ -0.04
CCNA1-201ENST00000255465 TSPYL1Q9H0U9 437 aa14.79□□□□□ -0.04
CCNA1-201ENST00000255465 YY1AP1Q9H869 796 aa14.79□□□□□ -0.04
CCNA1-201ENST00000255465 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
CCNA1-201ENST00000255465 NRKQ7Z2Y5 1582 aa14.79□□□□□ -0.04
CCNA1-201ENST00000255465 MCM4P33991 863 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms