RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ANKARQ7Z5J8 1434 aa24.04■■□□□ 1.44
PDLIM4-201ENST00000253754 COG3Q96JB2 828 aa24.04■■□□□ 1.44
PDLIM4-201ENST00000253754 FCHSD2O94868 740 aa24.04■■□□□ 1.44
PDLIM4-201ENST00000253754 PROSER2Q86WR7 435 aaPredicted RBP24.04■■□□□ 1.44
PDLIM4-201ENST00000253754 ADGRL3Q9HAR2 1447 aa24.03■■□□□ 1.44
PDLIM4-201ENST00000253754 RRS1Q15050 365 aaKnown RBP24.03■■□□□ 1.44
PDLIM4-201ENST00000253754 C8orf34Q49A92 452 aa24.03■■□□□ 1.44
PDLIM4-201ENST00000253754 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
PDLIM4-201ENST00000253754 NWD1Q149M9 1564 aa24.02■■□□□ 1.44
PDLIM4-201ENST00000253754 PCDHB15Q9Y5E8 787 aa24.01■■□□□ 1.43
PDLIM4-201ENST00000253754 MAP2P11137 1827 aaKnown RBP24.01■■□□□ 1.43
PDLIM4-201ENST00000253754 SMC4Q9NTJ3 1288 aa24.01■■□□□ 1.43
PDLIM4-201ENST00000253754 NRKQ7Z2Y5 1582 aa24■■□□□ 1.43
PDLIM4-201ENST00000253754 FAM161AQ3B820 660 aa24■■□□□ 1.43
PDLIM4-201ENST00000253754 PNNQ9H307 717 aaKnown RBP24■■□□□ 1.43
PDLIM4-201ENST00000253754 SSH1Q8WYL5 1049 aa24■■□□□ 1.43
PDLIM4-201ENST00000253754 IL16Q14005 1332 aa23.99■■□□□ 1.43
PDLIM4-201ENST00000253754 IL13P35225 146 aa23.99■■□□□ 1.43
PDLIM4-201ENST00000253754 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
PDLIM4-201ENST00000253754 ZNF335Q9H4Z2 1342 aaPredicted RBP23.99■■□□□ 1.43
PDLIM4-201ENST00000253754 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
PDLIM4-201ENST00000253754 CT47B1P0C2W7 299 aaPredicted RBP23.98■■□□□ 1.43
PDLIM4-201ENST00000253754 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
PDLIM4-201ENST00000253754 SSH2Q76I76 1423 aa23.97■■□□□ 1.43
PDLIM4-201ENST00000253754 CDK12Q9NYV4 1490 aaPredicted RBP23.97■■□□□ 1.43
PDLIM4-201ENST00000253754 NBR1Q14596 966 aa23.96■■□□□ 1.43
PDLIM4-201ENST00000253754 FTSJ3Q8IY81 847 aaKnown RBP23.96■■□□□ 1.43
PDLIM4-201ENST00000253754 MVPQ14764 893 aaKnown RBP23.96■■□□□ 1.43
PDLIM4-201ENST00000253754 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
PDLIM4-201ENST00000253754 DZIP1LQ8IYY4 767 aaKnown RBP23.95■■□□□ 1.43
PDLIM4-201ENST00000253754 PHF8Q9UPP1 1060 aa23.95■■□□□ 1.43
PDLIM4-201ENST00000253754 LAS1LQ9Y4W2 734 aaKnown RBP23.95■■□□□ 1.43
PDLIM4-201ENST00000253754 TRIM27P14373 513 aa23.95■■□□□ 1.42
PDLIM4-201ENST00000253754 ESCO1Q5FWF5 840 aa23.95■■□□□ 1.42
PDLIM4-201ENST00000253754 TTC21AQ8NDW8 1320 aa23.94■■□□□ 1.42
PDLIM4-201ENST00000253754 NEFMP07197 916 aa23.94■■□□□ 1.42
PDLIM4-201ENST00000253754 NFE2L2Q16236 605 aa23.94■■□□□ 1.42
PDLIM4-201ENST00000253754 STRCP1A6NGW2 1772 aa23.93■■□□□ 1.42
PDLIM4-201ENST00000253754 NOB1Q9ULX3 412 aaKnown RBP23.93■■□□□ 1.42
PDLIM4-201ENST00000253754 OVOS2A0A0J9YW53 1432 aa23.91■■□□□ 1.42
PDLIM4-201ENST00000253754 OVOS2Q6IE36 1432 aa23.91■■□□□ 1.42
PDLIM4-201ENST00000253754 C19orf44Q9H6X5 657 aa23.91■■□□□ 1.42
PDLIM4-201ENST00000253754 SOX12O15370 315 aa23.9■■□□□ 1.42
PDLIM4-201ENST00000253754 AAMPQ13685 434 aa23.9■■□□□ 1.42
PDLIM4-201ENST00000253754 TMEM94Q12767 1356 aa23.89■■□□□ 1.42
PDLIM4-201ENST00000253754 ATF7IPQ6VMQ6 1270 aa23.89■■□□□ 1.42
PDLIM4-201ENST00000253754 ORAI2Q96SN7 254 aa23.89■■□□□ 1.41
PDLIM4-201ENST00000253754 ITPRIPQ8IWB1 547 aa23.88■■□□□ 1.41
PDLIM4-201ENST00000253754 NUTM2GQ5VZR2 741 aa23.87■■□□□ 1.41
PDLIM4-201ENST00000253754 NLRP6P59044 892 aa23.86■■□□□ 1.41
PDLIM4-201ENST00000253754 PSME1Q06323 249 aa23.86■■□□□ 1.41
PDLIM4-201ENST00000253754 TMEM57Q8N5G2 664 aa23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 ABTB2Q8N961 1025 aa23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 PDZRN3Q9UPQ7 1066 aa23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 PIK3C2AO00443 1686 aa23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 FAM83GA6ND36 823 aa23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 AEBP1Q8IUX7 1158 aa23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 RWDD1Q9H446 243 aaPredicted RBP23.85■■□□□ 1.41
PDLIM4-201ENST00000253754 USP31Q70CQ4 1352 aa23.84■■□□□ 1.41
PDLIM4-201ENST00000253754 FOXO3O43524 673 aa23.84■■□□□ 1.41
PDLIM4-201ENST00000253754 ATF3P18847 181 aa23.84■■□□□ 1.41
PDLIM4-201ENST00000253754 TSPYL6Q8N831 410 aa23.84■■□□□ 1.41
PDLIM4-201ENST00000253754 EIF4A2Q14240 407 aaKnown RBP23.83■■□□□ 1.41
PDLIM4-201ENST00000253754 SLC4A3P48751 1232 aa23.82■■□□□ 1.4
PDLIM4-201ENST00000253754 ELL2O00472 640 aaPredicted RBP23.82■■□□□ 1.4
PDLIM4-201ENST00000253754 DCTN1Q14203 1278 aa23.82■■□□□ 1.4
PDLIM4-201ENST00000253754 DDRGK1Q96HY6 314 aa23.82■■□□□ 1.4
PDLIM4-201ENST00000253754 MBIPQ9NS73 344 aa23.82■■□□□ 1.4
PDLIM4-201ENST00000253754 KIF16BQ96L93 1317 aa23.82■■□□□ 1.4
PDLIM4-201ENST00000253754 DDX19BQ9UMR2 479 aa23.81■■□□□ 1.4
PDLIM4-201ENST00000253754 ALDH1L2Q3SY69 923 aa23.81■■□□□ 1.4
PDLIM4-201ENST00000253754 SEC24BO95487 1268 aa23.8■■□□□ 1.4
PDLIM4-201ENST00000253754 XPCQ01831 940 aaPredicted RBP23.8■■□□□ 1.4
PDLIM4-201ENST00000253754 IFT57Q9NWB7 429 aa23.8■■□□□ 1.4
PDLIM4-201ENST00000253754 SULT6B1Q6IMI4 303 aa23.8■■□□□ 1.4
PDLIM4-201ENST00000253754 C1orf167Q5SNV9 1468 aa23.8■■□□□ 1.4
PDLIM4-201ENST00000253754 VAMP4O75379 141 aa23.79■■□□□ 1.4
PDLIM4-201ENST00000253754 ZNF853P0CG23 659 aa23.79■■□□□ 1.4
PDLIM4-201ENST00000253754 HSP90AB2PQ58FF8 381 aa23.79■■□□□ 1.4
PDLIM4-201ENST00000253754 GNAI1P63096 354 aa23.79■■□□□ 1.4
PDLIM4-201ENST00000253754 CALD1Q05682 793 aaKnown RBP23.79■■□□□ 1.4
PDLIM4-201ENST00000253754 NCOA3Q9Y6Q9 1424 aa23.78■■□□□ 1.4
PDLIM4-201ENST00000253754 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
PDLIM4-201ENST00000253754 IPO8O15397 1037 aaKnown RBP23.77■■□□□ 1.4
PDLIM4-201ENST00000253754 PEAK1Q9H792 1746 aa23.76■■□□□ 1.39
PDLIM4-201ENST00000253754 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
PDLIM4-201ENST00000253754 ZBTB40Q9NUA8 1239 aa23.75■■□□□ 1.39
PDLIM4-201ENST00000253754 USP19O94966 1318 aa23.75■■□□□ 1.39
PDLIM4-201ENST00000253754 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
PDLIM4-201ENST00000253754 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
PDLIM4-201ENST00000253754 C8orf58Q8NAV2 365 aa23.75■■□□□ 1.39
PDLIM4-201ENST00000253754 MARF1Q9Y4F3 1742 aaKnown RBP23.74■■□□□ 1.39
PDLIM4-201ENST00000253754 DCCP43146 1447 aa23.74■■□□□ 1.39
PDLIM4-201ENST00000253754 MST1RQ04912 1400 aa23.74■■□□□ 1.39
PDLIM4-201ENST00000253754 LMOD3Q0VAK6 560 aa23.74■■□□□ 1.39
PDLIM4-201ENST00000253754 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
PDLIM4-201ENST00000253754 MSH6P52701 1360 aa23.74■■□□□ 1.39
PDLIM4-201ENST00000253754 AMPHP49418 695 aa23.73■■□□□ 1.39
PDLIM4-201ENST00000253754 HDAC1Q13547 482 aaPredicted RBP23.73■■□□□ 1.39
PDLIM4-201ENST00000253754 VIRMAQ69YN4 1812 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms