RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 NOB1Q9ULX3 412 aaKnown RBP23.83■■□□□ 1.41
SNX4-201ENST00000251775 MON2Q7Z3U7 1717 aa23.83■■□□□ 1.41
SNX4-201ENST00000251775 ATF7IPQ6VMQ6 1270 aa23.83■■□□□ 1.41
SNX4-201ENST00000251775 PHACTR3Q96KR7 559 aa23.83■■□□□ 1.41
SNX4-201ENST00000251775 C22orf23Q9BZE7 217 aa23.83■■□□□ 1.41
SNX4-201ENST00000251775 TECPR2O15040 1411 aa23.82■■□□□ 1.4
SNX4-201ENST00000251775 CPS1P31327 1500 aa23.82■■□□□ 1.4
SNX4-201ENST00000251775 TNRQ92752 1358 aa23.81■■□□□ 1.4
SNX4-201ENST00000251775 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
SNX4-201ENST00000251775 NAP1L5Q96NT1 182 aaPredicted RBP23.81■■□□□ 1.4
SNX4-201ENST00000251775 IL13P35225 146 aa23.8■■□□□ 1.4
SNX4-201ENST00000251775 AKAP12Q02952 1782 aa23.8■■□□□ 1.4
SNX4-201ENST00000251775 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
SNX4-201ENST00000251775 CCDC61Q9Y6R9 512 aa23.8■■□□□ 1.4
SNX4-201ENST00000251775 ITPRIPQ8IWB1 547 aa23.79■■□□□ 1.4
SNX4-201ENST00000251775 CDK12Q9NYV4 1490 aaPredicted RBP23.79■■□□□ 1.4
SNX4-201ENST00000251775 MRE11P49959 708 aa23.79■■□□□ 1.4
SNX4-201ENST00000251775 HDGFP51858 240 aaKnown RBP23.79■■□□□ 1.4
SNX4-201ENST00000251775 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
SNX4-201ENST00000251775 MFAP1P55081 439 aaKnown RBP23.78■■□□□ 1.4
SNX4-201ENST00000251775 DDX19BQ9UMR2 479 aa23.78■■□□□ 1.4
SNX4-201ENST00000251775 ITSN1Q15811 1721 aa23.78■■□□□ 1.4
SNX4-201ENST00000251775 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
SNX4-201ENST00000251775 TMEM57Q8N5G2 664 aa23.77■■□□□ 1.4
SNX4-201ENST00000251775 C3P01024 1663 aa23.77■■□□□ 1.4
SNX4-201ENST00000251775 PRR36Q9H6K5 1346 aa23.77■■□□□ 1.4
SNX4-201ENST00000251775 THUMPD2Q9BTF0 503 aaKnown RBP23.77■■□□□ 1.4
SNX4-201ENST00000251775 ZNF692Q9BU19 519 aaPredicted RBP23.77■■□□□ 1.4
SNX4-201ENST00000251775 TMEM2Q9UHN6 1383 aa23.77■■□□□ 1.4
SNX4-201ENST00000251775 COG3Q96JB2 828 aa23.76■■□□□ 1.39
SNX4-201ENST00000251775 KIF16BQ96L93 1317 aa23.76■■□□□ 1.39
SNX4-201ENST00000251775 ALDH1L2Q3SY69 923 aa23.75■■□□□ 1.39
SNX4-201ENST00000251775 DLG5Q8TDM6 1919 aa23.75■■□□□ 1.39
SNX4-201ENST00000251775 RRS1Q15050 365 aaKnown RBP23.75■■□□□ 1.39
SNX4-201ENST00000251775 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
SNX4-201ENST00000251775 HDAC1Q13547 482 aaPredicted RBP23.74■■□□□ 1.39
SNX4-201ENST00000251775 GRPEL1Q9HAV7 217 aa23.74■■□□□ 1.39
SNX4-201ENST00000251775 ADAMTS13Q76LX8 1427 aa23.73■■□□□ 1.39
SNX4-201ENST00000251775 IPO8O15397 1037 aaKnown RBP23.73■■□□□ 1.39
SNX4-201ENST00000251775 DDX11L8A8MPP1 907 aa23.72■■□□□ 1.39
SNX4-201ENST00000251775 NCOA3Q9Y6Q9 1424 aa23.72■■□□□ 1.39
SNX4-201ENST00000251775 ZBTB40Q9NUA8 1239 aa23.72■■□□□ 1.39
SNX4-201ENST00000251775 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.71■■□□□ 1.39
SNX4-201ENST00000251775 DDIT3P35638 169 aa23.71■■□□□ 1.39
SNX4-201ENST00000251775 HSCBQ8IWL3 235 aa23.71■■□□□ 1.39
SNX4-201ENST00000251775 VAMP4O75379 141 aa23.69■■□□□ 1.38
SNX4-201ENST00000251775 BRPF1P55201 1214 aaPredicted RBP23.69■■□□□ 1.38
SNX4-201ENST00000251775 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
SNX4-201ENST00000251775 ZNF428Q96B54 188 aa23.68■■□□□ 1.38
SNX4-201ENST00000251775 ISY1Q9ULR0 285 aaKnown RBP23.68■■□□□ 1.38
SNX4-201ENST00000251775 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
SNX4-201ENST00000251775 LTKP29376 864 aa23.68■■□□□ 1.38
SNX4-201ENST00000251775 CALD1Q05682 793 aaKnown RBP23.68■■□□□ 1.38
SNX4-201ENST00000251775 IFT57Q9NWB7 429 aa23.68■■□□□ 1.38
SNX4-201ENST00000251775 ERBB4Q15303 1308 aa23.67■■□□□ 1.38
SNX4-201ENST00000251775 HSP90AA1P07900 732 aaKnown RBP23.67■■□□□ 1.38
SNX4-201ENST00000251775 GNAI1P63096 354 aa23.67■■□□□ 1.38
SNX4-201ENST00000251775 GLIPR1L2Q4G1C9 344 aa23.67■■□□□ 1.38
SNX4-201ENST00000251775 SMC5Q8IY18 1101 aa23.67■■□□□ 1.38
SNX4-201ENST00000251775 MBIPQ9NS73 344 aa23.67■■□□□ 1.38
SNX4-201ENST00000251775 ESPNB1AK53 854 aa23.66■■□□□ 1.38
SNX4-201ENST00000251775 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
SNX4-201ENST00000251775 NRKQ7Z2Y5 1582 aa23.66■■□□□ 1.38
SNX4-201ENST00000251775 TOPAZ1Q8N9V7 1692 aa23.65■■□□□ 1.38
SNX4-201ENST00000251775 HSP90AA2PQ14568 343 aaPredicted RBP23.65■■□□□ 1.38
SNX4-201ENST00000251775 ELL2O00472 640 aaPredicted RBP23.64■■□□□ 1.38
SNX4-201ENST00000251775 RRP9O43818 475 aaKnown RBP23.64■■□□□ 1.38
SNX4-201ENST00000251775 PLEKHG1Q9ULL1 1385 aa23.64■■□□□ 1.38
SNX4-201ENST00000251775 NUTM2FA1L443 756 aa23.64■■□□□ 1.37
SNX4-201ENST00000251775 TTC21BQ7Z4L5 1316 aa23.63■■□□□ 1.37
SNX4-201ENST00000251775 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
SNX4-201ENST00000251775 RBM25P49756 843 aaKnown RBP23.63■■□□□ 1.37
SNX4-201ENST00000251775 ACEP12821 1306 aa23.63■■□□□ 1.37
SNX4-201ENST00000251775 SNX21Q969T3 373 aa23.63■■□□□ 1.37
SNX4-201ENST00000251775 CEBPAP49715 358 aaPredicted RBP23.62■■□□□ 1.37
SNX4-201ENST00000251775 TNPO1Q92973 898 aaKnown RBP23.62■■□□□ 1.37
SNX4-201ENST00000251775 LMOD3Q0VAK6 560 aa23.61■■□□□ 1.37
SNX4-201ENST00000251775 GAS2L3Q86XJ1 694 aa23.61■■□□□ 1.37
SNX4-201ENST00000251775 CFAP44Q96MT7 982 aa23.61■■□□□ 1.37
SNX4-201ENST00000251775 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
SNX4-201ENST00000251775 DCTN1Q14203 1278 aa23.61■■□□□ 1.37
SNX4-201ENST00000251775 PTPRUQ92729 1446 aa23.61■■□□□ 1.37
SNX4-201ENST00000251775 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
SNX4-201ENST00000251775 C8orf58Q8NAV2 365 aa23.6■■□□□ 1.37
SNX4-201ENST00000251775 ARHGAP45Q92619 1136 aa23.6■■□□□ 1.37
SNX4-201ENST00000251775 PLEKHG3A1L390 1219 aa23.6■■□□□ 1.37
SNX4-201ENST00000251775 TWISTNBQ3B726 338 aaPredicted RBP23.6■■□□□ 1.37
SNX4-201ENST00000251775 AEBP1Q8IUX7 1158 aa23.6■■□□□ 1.37
SNX4-201ENST00000251775 SLC26A8Q96RN1 970 aa23.6■■□□□ 1.37
SNX4-201ENST00000251775 OVOS2A0A0J9YW53 1432 aa23.59■■□□□ 1.37
SNX4-201ENST00000251775 OVOS2Q6IE36 1432 aa23.59■■□□□ 1.37
SNX4-201ENST00000251775 ZBTB7BO15156 539 aaPredicted RBP23.59■■□□□ 1.37
SNX4-201ENST00000251775 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
SNX4-201ENST00000251775 CIZ1Q9ULV3 898 aaPredicted RBP23.58■■□□□ 1.37
SNX4-201ENST00000251775 USP6P35125 1406 aa23.58■■□□□ 1.37
SNX4-201ENST00000251775 PEAK1Q9H792 1746 aa23.57■■□□□ 1.36
SNX4-201ENST00000251775 PKNOX2Q96KN3 472 aa23.57■■□□□ 1.36
SNX4-201ENST00000251775 NALCNQ8IZF0 1738 aa23.57■■□□□ 1.36
SNX4-201ENST00000251775 RAB3GAP1Q15042 981 aa23.57■■□□□ 1.36
SNX4-201ENST00000251775 SULT6B1Q6IMI4 303 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms