RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SEC24BO95487 1268 aa20.09■□□□□ 0.81
LRFN1-201ENST00000248668 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
LRFN1-201ENST00000248668 TECPR2O15040 1411 aa20.08■□□□□ 0.81
LRFN1-201ENST00000248668 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
LRFN1-201ENST00000248668 PTPRUQ92729 1446 aa20.08■□□□□ 0.81
LRFN1-201ENST00000248668 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.8
LRFN1-201ENST00000248668 SULT6B1Q6IMI4 303 aa20.08■□□□□ 0.8
LRFN1-201ENST00000248668 CDC42BPGQ6DT37 1551 aa20.07■□□□□ 0.8
LRFN1-201ENST00000248668 HSP90AB2PQ58FF8 381 aa20.07■□□□□ 0.8
LRFN1-201ENST00000248668 SIRT1Q96EB6 747 aa20.07■□□□□ 0.8
LRFN1-201ENST00000248668 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
LRFN1-201ENST00000248668 MBIPQ9NS73 344 aa20.06■□□□□ 0.8
LRFN1-201ENST00000248668 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
LRFN1-201ENST00000248668 EIF4A2Q14240 407 aaKnown RBP20.06■□□□□ 0.8
LRFN1-201ENST00000248668 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
LRFN1-201ENST00000248668 DAXXQ9UER7 740 aaPredicted RBP20.06■□□□□ 0.8
LRFN1-201ENST00000248668 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
LRFN1-201ENST00000248668 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
LRFN1-201ENST00000248668 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
LRFN1-201ENST00000248668 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.04■□□□□ 0.8
LRFN1-201ENST00000248668 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
LRFN1-201ENST00000248668 AATKQ6ZMQ8 1374 aa20.03■□□□□ 0.8
LRFN1-201ENST00000248668 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
LRFN1-201ENST00000248668 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
LRFN1-201ENST00000248668 KIF16BQ96L93 1317 aa20.02■□□□□ 0.8
LRFN1-201ENST00000248668 C8orf58Q8NAV2 365 aa20.02■□□□□ 0.8
LRFN1-201ENST00000248668 IPO8O15397 1037 aaKnown RBP20.02■□□□□ 0.8
LRFN1-201ENST00000248668 VAMP4O75379 141 aa20.02■□□□□ 0.8
LRFN1-201ENST00000248668 KRT24Q2M2I5 525 aa20.02■□□□□ 0.8
LRFN1-201ENST00000248668 GNAI1P63096 354 aa20.01■□□□□ 0.79
LRFN1-201ENST00000248668 MCM10Q7L590 875 aa20.01■□□□□ 0.79
LRFN1-201ENST00000248668 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
LRFN1-201ENST00000248668 THEMISQ8N1K5 641 aaPredicted RBP20■□□□□ 0.79
LRFN1-201ENST00000248668 PLEKHG3A1L390 1219 aa20■□□□□ 0.79
LRFN1-201ENST00000248668 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
LRFN1-201ENST00000248668 KCNA6P17658 529 aa19.99■□□□□ 0.79
LRFN1-201ENST00000248668 AAMPQ13685 434 aa19.99■□□□□ 0.79
LRFN1-201ENST00000248668 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
LRFN1-201ENST00000248668 USP6P35125 1406 aa19.98■□□□□ 0.79
LRFN1-201ENST00000248668 CALD1Q05682 793 aaKnown RBP19.98■□□□□ 0.79
LRFN1-201ENST00000248668 C14orf37Q86TY3 774 aa19.98■□□□□ 0.79
LRFN1-201ENST00000248668 MON2Q7Z3U7 1717 aa19.98■□□□□ 0.79
LRFN1-201ENST00000248668 ALDH1L2Q3SY69 923 aa19.98■□□□□ 0.79
LRFN1-201ENST00000248668 ITSN1Q15811 1721 aa19.98■□□□□ 0.79
LRFN1-201ENST00000248668 ZBTB40Q9NUA8 1239 aa19.97■□□□□ 0.79
LRFN1-201ENST00000248668 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
LRFN1-201ENST00000248668 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
LRFN1-201ENST00000248668 TBX22Q9Y458 520 aa19.97■□□□□ 0.79
LRFN1-201ENST00000248668 FOXO3O43524 673 aa19.96■□□□□ 0.79
LRFN1-201ENST00000248668 CFAP44Q96MT7 982 aa19.96■□□□□ 0.79
LRFN1-201ENST00000248668 C3P01024 1663 aa19.96■□□□□ 0.79
LRFN1-201ENST00000248668 USP19O94966 1318 aa19.96■□□□□ 0.79
LRFN1-201ENST00000248668 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
LRFN1-201ENST00000248668 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
LRFN1-201ENST00000248668 ZNF853P0CG23 659 aa19.95■□□□□ 0.78
LRFN1-201ENST00000248668 AMPHP49418 695 aa19.94■□□□□ 0.78
LRFN1-201ENST00000248668 NLRP6P59044 892 aa19.94■□□□□ 0.78
LRFN1-201ENST00000248668 LNPKQ9C0E8 428 aa19.94■□□□□ 0.78
LRFN1-201ENST00000248668 AKAP12Q02952 1782 aa19.94■□□□□ 0.78
LRFN1-201ENST00000248668 LTV1Q96GA3 475 aaPredicted RBP19.94■□□□□ 0.78
LRFN1-201ENST00000248668 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
LRFN1-201ENST00000248668 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
LRFN1-201ENST00000248668 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
LRFN1-201ENST00000248668 ZBTB7CA1YPR0 619 aa19.9■□□□□ 0.78
LRFN1-201ENST00000248668 DLG5Q8TDM6 1919 aa19.9■□□□□ 0.78
LRFN1-201ENST00000248668 PKNOX2Q96KN3 472 aa19.89■□□□□ 0.78
LRFN1-201ENST00000248668 FER1L4A9Z1Z3 1794 aa19.89■□□□□ 0.77
LRFN1-201ENST00000248668 ZBTB7BO15156 539 aaPredicted RBP19.88■□□□□ 0.77
LRFN1-201ENST00000248668 MFAP1P55081 439 aaKnown RBP19.88■□□□□ 0.77
LRFN1-201ENST00000248668 MTHFSDQ2M296 383 aaKnown RBP19.87■□□□□ 0.77
LRFN1-201ENST00000248668 SMC5Q8IY18 1101 aa19.87■□□□□ 0.77
LRFN1-201ENST00000248668 ABTB2Q8N961 1025 aa19.87■□□□□ 0.77
LRFN1-201ENST00000248668 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
LRFN1-201ENST00000248668 UPF2Q9HAU5 1272 aaKnown RBP19.87■□□□□ 0.77
LRFN1-201ENST00000248668 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
LRFN1-201ENST00000248668 ARHGAP23Q9P227 1491 aa19.87■□□□□ 0.77
LRFN1-201ENST00000248668 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
LRFN1-201ENST00000248668 EYA1Q99502 592 aa19.86■□□□□ 0.77
LRFN1-201ENST00000248668 BRPF3Q9ULD4 1205 aa19.86■□□□□ 0.77
LRFN1-201ENST00000248668 SLIT1O75093 1534 aa19.86■□□□□ 0.77
LRFN1-201ENST00000248668 PEAK1Q9H792 1746 aa19.86■□□□□ 0.77
LRFN1-201ENST00000248668 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
LRFN1-201ENST00000248668 DIP2AQ14689 1571 aa19.85■□□□□ 0.77
LRFN1-201ENST00000248668 TTC21AQ8NDW8 1320 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 NRKQ7Z2Y5 1582 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 SSH2Q76I76 1423 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 RTF1Q92541 710 aaKnown RBP19.84■□□□□ 0.77
LRFN1-201ENST00000248668 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 SPRYD3Q8NCJ5 442 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 TOPAZ1Q8N9V7 1692 aa19.84■□□□□ 0.77
LRFN1-201ENST00000248668 BRPF1P55201 1214 aaPredicted RBP19.83■□□□□ 0.76
LRFN1-201ENST00000248668 NFKBIBQ15653 356 aa19.83■□□□□ 0.76
LRFN1-201ENST00000248668 NECTIN2Q92692 538 aa19.83■□□□□ 0.76
LRFN1-201ENST00000248668 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 CHL1O00533 1208 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 SIRT2Q8IXJ6 389 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 FLT4P35916 1363 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
LRFN1-201ENST00000248668 ARHGAP45Q92619 1136 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms