RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
PEX1-201ENST00000248633 ACEP12821 1306 aa16.41■□□□□ 0.22
PEX1-201ENST00000248633 RLBP1P12271 317 aa16.41■□□□□ 0.22
PEX1-201ENST00000248633 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
PEX1-201ENST00000248633 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
PEX1-201ENST00000248633 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
PEX1-201ENST00000248633 MCCP23508 829 aa16.4■□□□□ 0.22
PEX1-201ENST00000248633 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
PEX1-201ENST00000248633 CAMSAP1Q5T5Y3 1602 aa16.4■□□□□ 0.22
PEX1-201ENST00000248633 KCNJ4P48050 445 aa16.4■□□□□ 0.22
PEX1-201ENST00000248633 XPCQ01831 940 aaPredicted RBP16.4■□□□□ 0.22
PEX1-201ENST00000248633 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
PEX1-201ENST00000248633 DRC7Q8IY82 874 aa16.4■□□□□ 0.22
PEX1-201ENST00000248633 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
PEX1-201ENST00000248633 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
PEX1-201ENST00000248633 PRPF40AO75400 957 aaKnown RBP16.39■□□□□ 0.21
PEX1-201ENST00000248633 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
PEX1-201ENST00000248633 RILPL2Q969X0 211 aa16.39■□□□□ 0.21
PEX1-201ENST00000248633 KCNA6P17658 529 aa16.39■□□□□ 0.21
PEX1-201ENST00000248633 METP08581 1390 aa16.38■□□□□ 0.21
PEX1-201ENST00000248633 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
PEX1-201ENST00000248633 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
PEX1-201ENST00000248633 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
PEX1-201ENST00000248633 CHAF1AQ13111 956 aaPredicted RBP16.38■□□□□ 0.21
PEX1-201ENST00000248633 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
PEX1-201ENST00000248633 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
PEX1-201ENST00000248633 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
PEX1-201ENST00000248633 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
PEX1-201ENST00000248633 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
PEX1-201ENST00000248633 VWDEQ8N2E2 1590 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
PEX1-201ENST00000248633 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 DEPDC5O75140 1603 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 GOLGA6L4A6NEF3 574 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 FCHSD2O94868 740 aa16.36■□□□□ 0.21
PEX1-201ENST00000248633 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
PEX1-201ENST00000248633 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
PEX1-201ENST00000248633 SSFA2P28290 1259 aa16.35■□□□□ 0.21
PEX1-201ENST00000248633 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
PEX1-201ENST00000248633 CHMP3Q9Y3E7 222 aa16.35■□□□□ 0.21
PEX1-201ENST00000248633 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
PEX1-201ENST00000248633 AAMPQ13685 434 aa16.34■□□□□ 0.21
PEX1-201ENST00000248633 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
PEX1-201ENST00000248633 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
PEX1-201ENST00000248633 ZMYND15Q9H091 742 aa16.34■□□□□ 0.21
PEX1-201ENST00000248633 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
PEX1-201ENST00000248633 FOXO3O43524 673 aa16.34■□□□□ 0.21
PEX1-201ENST00000248633 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
PEX1-201ENST00000248633 WDR63Q8IWG1 891 aa16.33■□□□□ 0.21
PEX1-201ENST00000248633 NECTIN2Q92692 538 aa16.33■□□□□ 0.21
PEX1-201ENST00000248633 CDC45O75419 566 aa16.33■□□□□ 0.2
PEX1-201ENST00000248633 TRIM27P14373 513 aa16.33■□□□□ 0.2
PEX1-201ENST00000248633 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
PEX1-201ENST00000248633 RRP9O43818 475 aaKnown RBP16.33■□□□□ 0.2
PEX1-201ENST00000248633 GNAI1P63096 354 aa16.33■□□□□ 0.2
PEX1-201ENST00000248633 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
PEX1-201ENST00000248633 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
PEX1-201ENST00000248633 MROH1Q8NDA8 1641 aa16.32■□□□□ 0.2
PEX1-201ENST00000248633 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
PEX1-201ENST00000248633 CLTCQ00610 1675 aaKnown RBP16.32■□□□□ 0.2
PEX1-201ENST00000248633 AGLP35573 1532 aa16.32■□□□□ 0.2
PEX1-201ENST00000248633 NUCB2P80303 420 aa16.31■□□□□ 0.2
PEX1-201ENST00000248633 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
PEX1-201ENST00000248633 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
PEX1-201ENST00000248633 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
PEX1-201ENST00000248633 HSPA2P54652 639 aa16.31■□□□□ 0.2
PEX1-201ENST00000248633 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
PEX1-201ENST00000248633 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
PEX1-201ENST00000248633 ZMYM4Q5VZL5 1548 aa16.3■□□□□ 0.2
PEX1-201ENST00000248633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.3■□□□□ 0.2
PEX1-201ENST00000248633 TPM2P07951 284 aa16.29■□□□□ 0.2
PEX1-201ENST00000248633 HMMRO75330 724 aa16.29■□□□□ 0.2
PEX1-201ENST00000248633 CLCN1P35523 988 aa16.29■□□□□ 0.2
PEX1-201ENST00000248633 NEK4P51957 841 aa16.29■□□□□ 0.2
PEX1-201ENST00000248633 FGD1P98174 961 aa16.29■□□□□ 0.2
PEX1-201ENST00000248633 SYNMO15061 1565 aa16.29■□□□□ 0.2
PEX1-201ENST00000248633 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
PEX1-201ENST00000248633 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
PEX1-201ENST00000248633 INTS3Q68E01 1043 aaKnown RBP16.28■□□□□ 0.2
PEX1-201ENST00000248633 PLEKHG1Q9ULL1 1385 aa16.28■□□□□ 0.2
PEX1-201ENST00000248633 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
PEX1-201ENST00000248633 REC8O95072 547 aa16.28■□□□□ 0.2
PEX1-201ENST00000248633 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
PEX1-201ENST00000248633 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
PEX1-201ENST00000248633 SIRT1Q96EB6 747 aa16.27■□□□□ 0.2
PEX1-201ENST00000248633 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
PEX1-201ENST00000248633 TEFQ10587 303 aa16.26■□□□□ 0.19
PEX1-201ENST00000248633 ZSCAN30Q86W11 494 aa16.26■□□□□ 0.19
PEX1-201ENST00000248633 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
PEX1-201ENST00000248633 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
PEX1-201ENST00000248633 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
PEX1-201ENST00000248633 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
PEX1-201ENST00000248633 UQCRHP07919 91 aa16.25■□□□□ 0.19
PEX1-201ENST00000248633 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
PEX1-201ENST00000248633 SYCE3A1L190 88 aa16.25■□□□□ 0.19
PEX1-201ENST00000248633 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
PEX1-201ENST00000248633 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
PEX1-201ENST00000248633 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms