RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TXNDC2Q86VQ3 553 aa27.38■■□□□ 1.97
SH2D3A-201ENST00000245908 DLG5Q8TDM6 1919 aa27.37■■□□□ 1.97
SH2D3A-201ENST00000245908 IFT57Q9NWB7 429 aa27.37■■□□□ 1.97
SH2D3A-201ENST00000245908 CCDC61Q9Y6R9 512 aa27.36■■□□□ 1.97
SH2D3A-201ENST00000245908 GNAI1P63096 354 aa27.36■■□□□ 1.97
SH2D3A-201ENST00000245908 ZRANB1Q9UGI0 708 aa27.36■■□□□ 1.97
SH2D3A-201ENST00000245908 PTCH1Q13635 1447 aa27.35■■□□□ 1.97
SH2D3A-201ENST00000245908 VAMP4O75379 141 aa27.35■■□□□ 1.97
SH2D3A-201ENST00000245908 ZNF853P0CG23 659 aa27.35■■□□□ 1.97
SH2D3A-201ENST00000245908 COG3Q96JB2 828 aa27.35■■□□□ 1.97
SH2D3A-201ENST00000245908 PIK3R4Q99570 1358 aa27.35■■□□□ 1.97
SH2D3A-201ENST00000245908 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
SH2D3A-201ENST00000245908 ARHGAP45Q92619 1136 aa27.34■■□□□ 1.97
SH2D3A-201ENST00000245908 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
SH2D3A-201ENST00000245908 THUMPD2Q9BTF0 503 aaKnown RBP27.33■■□□□ 1.97
SH2D3A-201ENST00000245908 ESF1Q9H501 851 aaKnown RBP27.32■■□□□ 1.96
SH2D3A-201ENST00000245908 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
SH2D3A-201ENST00000245908 NRKQ7Z2Y5 1582 aa27.32■■□□□ 1.96
SH2D3A-201ENST00000245908 UBR1Q8IWV7 1749 aa27.31■■□□□ 1.96
SH2D3A-201ENST00000245908 LMOD3Q0VAK6 560 aa27.31■■□□□ 1.96
SH2D3A-201ENST00000245908 TNRQ92752 1358 aa27.31■■□□□ 1.96
SH2D3A-201ENST00000245908 NUCB1Q02818 461 aa27.3■■□□□ 1.96
SH2D3A-201ENST00000245908 NCKAP5LQ9HCH0 1330 aa27.3■■□□□ 1.96
SH2D3A-201ENST00000245908 UBE2Q2Q8WVN8 375 aa27.3■■□□□ 1.96
SH2D3A-201ENST00000245908 ZNF692Q9BU19 519 aaPredicted RBP27.3■■□□□ 1.96
SH2D3A-201ENST00000245908 TBC1D2Q9BYX2 928 aa27.3■■□□□ 1.96
SH2D3A-201ENST00000245908 CHMP4BQ9H444 224 aaKnown RBP27.29■■□□□ 1.96
SH2D3A-201ENST00000245908 ANTXR1Q9H6X2 564 aa27.29■■□□□ 1.96
SH2D3A-201ENST00000245908 MBIPQ9NS73 344 aa27.29■■□□□ 1.96
SH2D3A-201ENST00000245908 TSPYL6Q8N831 410 aa27.29■■□□□ 1.96
SH2D3A-201ENST00000245908 PRR36Q9H6K5 1346 aa27.28■■□□□ 1.96
SH2D3A-201ENST00000245908 TMEM2Q9UHN6 1383 aa27.28■■□□□ 1.96
SH2D3A-201ENST00000245908 RRS1Q15050 365 aaKnown RBP27.28■■□□□ 1.96
SH2D3A-201ENST00000245908 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.28■■□□□ 1.96
SH2D3A-201ENST00000245908 ZBTB7BO15156 539 aaPredicted RBP27.27■■□□□ 1.96
SH2D3A-201ENST00000245908 CFAP44Q96MT7 982 aa27.27■■□□□ 1.96
SH2D3A-201ENST00000245908 C22orf23Q9BZE7 217 aa27.27■■□□□ 1.96
SH2D3A-201ENST00000245908 TOPAZ1Q8N9V7 1692 aa27.26■■□□□ 1.95
SH2D3A-201ENST00000245908 SLKQ9H2G2 1235 aaPredicted RBP27.26■■□□□ 1.95
SH2D3A-201ENST00000245908 ABCC4O15439 1325 aa27.25■■□□□ 1.95
SH2D3A-201ENST00000245908 ROBO2Q9HCK4 1378 aa27.24■■□□□ 1.95
SH2D3A-201ENST00000245908 ADAMTS13Q76LX8 1427 aa27.24■■□□□ 1.95
SH2D3A-201ENST00000245908 MFAP1P55081 439 aaKnown RBP27.24■■□□□ 1.95
SH2D3A-201ENST00000245908 CHD1LQ86WJ1 897 aa27.24■■□□□ 1.95
SH2D3A-201ENST00000245908 TWISTNBQ3B726 338 aaPredicted RBP27.23■■□□□ 1.95
SH2D3A-201ENST00000245908 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.23■■□□□ 1.95
SH2D3A-201ENST00000245908 GCC1Q96CN9 775 aa27.21■■□□□ 1.95
SH2D3A-201ENST00000245908 LNPKQ9C0E8 428 aa27.21■■□□□ 1.95
SH2D3A-201ENST00000245908 BRPF3Q9ULD4 1205 aa27.2■■□□□ 1.95
SH2D3A-201ENST00000245908 C8orf58Q8NAV2 365 aa27.19■■□□□ 1.94
SH2D3A-201ENST00000245908 NALCNQ8IZF0 1738 aa27.19■■□□□ 1.94
SH2D3A-201ENST00000245908 OVOS2A0A0J9YW53 1432 aa27.19■■□□□ 1.94
SH2D3A-201ENST00000245908 OVOS2Q6IE36 1432 aa27.19■■□□□ 1.94
SH2D3A-201ENST00000245908 ELL2O00472 640 aaPredicted RBP27.19■■□□□ 1.94
SH2D3A-201ENST00000245908 TTC21BQ7Z4L5 1316 aa27.18■■□□□ 1.94
SH2D3A-201ENST00000245908 FAM83GA6ND36 823 aa27.18■■□□□ 1.94
SH2D3A-201ENST00000245908 API5Q9BZZ5 524 aaKnown RBP27.18■■□□□ 1.94
SH2D3A-201ENST00000245908 PLEKHG1Q9ULL1 1385 aa27.16■■□□□ 1.94
SH2D3A-201ENST00000245908 EIF4A2Q14240 407 aaKnown RBP27.16■■□□□ 1.94
SH2D3A-201ENST00000245908 KIF24Q5T7B8 1368 aa27.16■■□□□ 1.94
SH2D3A-201ENST00000245908 BMP2KLQ5H9B9 411 aa27.15■■□□□ 1.94
SH2D3A-201ENST00000245908 PLEKHG3A1L390 1219 aa27.15■■□□□ 1.94
SH2D3A-201ENST00000245908 C1orf115Q9H7X2 142 aa27.15■■□□□ 1.94
SH2D3A-201ENST00000245908 RGPD1P0DJD0 1748 aa27.15■■□□□ 1.94
SH2D3A-201ENST00000245908 ACEP12821 1306 aa27.14■■□□□ 1.93
SH2D3A-201ENST00000245908 USP6P35125 1406 aa27.13■■□□□ 1.93
SH2D3A-201ENST00000245908 PEAK1Q9H792 1746 aa27.13■■□□□ 1.93
SH2D3A-201ENST00000245908 RBM25P49756 843 aaKnown RBP27.13■■□□□ 1.93
SH2D3A-201ENST00000245908 DCTN1Q14203 1278 aa27.13■■□□□ 1.93
SH2D3A-201ENST00000245908 ANKRD45Q5TZF3 282 aa27.13■■□□□ 1.93
SH2D3A-201ENST00000245908 SIRT2Q8IXJ6 389 aa27.13■■□□□ 1.93
SH2D3A-201ENST00000245908 AEBP1Q8IUX7 1158 aa27.12■■□□□ 1.93
SH2D3A-201ENST00000245908 SULT6B1Q6IMI4 303 aa27.11■■□□□ 1.93
SH2D3A-201ENST00000245908 USP31Q70CQ4 1352 aa27.1■■□□□ 1.93
SH2D3A-201ENST00000245908 LTKP29376 864 aa27.08■■□□□ 1.93
SH2D3A-201ENST00000245908 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
SH2D3A-201ENST00000245908 HAP1P54257 671 aaPredicted RBP27.07■■□□□ 1.92
SH2D3A-201ENST00000245908 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
SH2D3A-201ENST00000245908 CHL1O00533 1208 aa27.06■■□□□ 1.92
SH2D3A-201ENST00000245908 HSCBQ8IWL3 235 aa27.06■■□□□ 1.92
SH2D3A-201ENST00000245908 KIAA0232Q92628 1395 aa27.06■■□□□ 1.92
SH2D3A-201ENST00000245908 CHMP5Q9NZZ3 219 aa27.06■■□□□ 1.92
SH2D3A-201ENST00000245908 NCOA3Q9Y6Q9 1424 aa27.05■■□□□ 1.92
SH2D3A-201ENST00000245908 INTS3Q68E01 1043 aaKnown RBP27.05■■□□□ 1.92
SH2D3A-201ENST00000245908 SNX21Q969T3 373 aa27.05■■□□□ 1.92
SH2D3A-201ENST00000245908 FMN2Q9NZ56 1722 aa27.05■■□□□ 1.92
SH2D3A-201ENST00000245908 RGS12O14924 1447 aa27.04■■□□□ 1.92
SH2D3A-201ENST00000245908 SPRYD3Q8NCJ5 442 aa27.04■■□□□ 1.92
SH2D3A-201ENST00000245908 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
SH2D3A-201ENST00000245908 ARHGEF10O15013 1369 aa27.01■■□□□ 1.91
SH2D3A-201ENST00000245908 NUTM2FA1L443 756 aa27.01■■□□□ 1.91
SH2D3A-201ENST00000245908 TTC21AQ8NDW8 1320 aa27■■□□□ 1.91
SH2D3A-201ENST00000245908 MCM10Q7L590 875 aa27■■□□□ 1.91
SH2D3A-201ENST00000245908 CRB1P82279 1406 aa27■■□□□ 1.91
SH2D3A-201ENST00000245908 SLIT1O75093 1534 aa26.99■■□□□ 1.91
SH2D3A-201ENST00000245908 DCTPP1Q9H773 170 aa26.99■■□□□ 1.91
SH2D3A-201ENST00000245908 MCM4P33991 863 aa26.99■■□□□ 1.91
SH2D3A-201ENST00000245908 KRT24Q2M2I5 525 aa26.99■■□□□ 1.91
SH2D3A-201ENST00000245908 TBC1D9Q6ZT07 1266 aa26.99■■□□□ 1.91
SH2D3A-201ENST00000245908 ARHGAP23Q9P227 1491 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms