RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
PLOD3-201ENST00000223127 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
PLOD3-201ENST00000223127 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
PLOD3-201ENST00000223127 PHACTR3Q96KR7 559 aa16.76■□□□□ 0.27
PLOD3-201ENST00000223127 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
PLOD3-201ENST00000223127 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
PLOD3-201ENST00000223127 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
PLOD3-201ENST00000223127 PNNQ9H307 717 aaKnown RBP16.75■□□□□ 0.27
PLOD3-201ENST00000223127 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
PLOD3-201ENST00000223127 NPHP4O75161 1426 aaPredicted RBP16.74■□□□□ 0.27
PLOD3-201ENST00000223127 UBE2Q2Q8WVN8 375 aa16.74■□□□□ 0.27
PLOD3-201ENST00000223127 MYH16Q9H6N6 1097 aa16.73■□□□□ 0.27
PLOD3-201ENST00000223127 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
PLOD3-201ENST00000223127 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
PLOD3-201ENST00000223127 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
PLOD3-201ENST00000223127 RGS3P49796 1198 aa16.73■□□□□ 0.27
PLOD3-201ENST00000223127 NLRP6P59044 892 aa16.72■□□□□ 0.27
PLOD3-201ENST00000223127 LRRC7Q96NW7 1537 aa16.72■□□□□ 0.27
PLOD3-201ENST00000223127 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
PLOD3-201ENST00000223127 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
PLOD3-201ENST00000223127 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
PLOD3-201ENST00000223127 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
PLOD3-201ENST00000223127 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
PLOD3-201ENST00000223127 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
PLOD3-201ENST00000223127 ESCO1Q5FWF5 840 aa16.7■□□□□ 0.26
PLOD3-201ENST00000223127 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
PLOD3-201ENST00000223127 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
PLOD3-201ENST00000223127 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
PLOD3-201ENST00000223127 FAM43AQ8N2R8 423 aa16.69■□□□□ 0.26
PLOD3-201ENST00000223127 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
PLOD3-201ENST00000223127 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
PLOD3-201ENST00000223127 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
PLOD3-201ENST00000223127 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
PLOD3-201ENST00000223127 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
PLOD3-201ENST00000223127 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
PLOD3-201ENST00000223127 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
PLOD3-201ENST00000223127 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
PLOD3-201ENST00000223127 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
PLOD3-201ENST00000223127 USP19O94966 1318 aa16.68■□□□□ 0.26
PLOD3-201ENST00000223127 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
PLOD3-201ENST00000223127 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
PLOD3-201ENST00000223127 HSPA2P54652 639 aa16.67■□□□□ 0.26
PLOD3-201ENST00000223127 PANK1Q8TE04 598 aa16.67■□□□□ 0.26
PLOD3-201ENST00000223127 AMPHP49418 695 aa16.66■□□□□ 0.26
PLOD3-201ENST00000223127 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
PLOD3-201ENST00000223127 NALCNQ8IZF0 1738 aa16.66■□□□□ 0.26
PLOD3-201ENST00000223127 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
PLOD3-201ENST00000223127 USP31Q70CQ4 1352 aa16.66■□□□□ 0.26
PLOD3-201ENST00000223127 PSME1Q06323 249 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 FMN2Q9NZ56 1722 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
PLOD3-201ENST00000223127 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
PLOD3-201ENST00000223127 DCTN1Q14203 1278 aa16.64■□□□□ 0.25
PLOD3-201ENST00000223127 FOXO3O43524 673 aa16.63■□□□□ 0.25
PLOD3-201ENST00000223127 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
PLOD3-201ENST00000223127 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
PLOD3-201ENST00000223127 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
PLOD3-201ENST00000223127 SMC4Q9NTJ3 1288 aa16.62■□□□□ 0.25
PLOD3-201ENST00000223127 IL16Q14005 1332 aa16.61■□□□□ 0.25
PLOD3-201ENST00000223127 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
PLOD3-201ENST00000223127 PEAK1Q9H792 1746 aa16.61■□□□□ 0.25
PLOD3-201ENST00000223127 FLT4P35916 1363 aa16.6■□□□□ 0.25
PLOD3-201ENST00000223127 IGHDP01880 384 aa16.6■□□□□ 0.25
PLOD3-201ENST00000223127 RLBP1P12271 317 aa16.6■□□□□ 0.25
PLOD3-201ENST00000223127 PDE3AQ14432 1141 aa16.6■□□□□ 0.25
PLOD3-201ENST00000223127 ELL2O00472 640 aaPredicted RBP16.59■□□□□ 0.25
PLOD3-201ENST00000223127 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
PLOD3-201ENST00000223127 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
PLOD3-201ENST00000223127 SEC24BO95487 1268 aa16.59■□□□□ 0.25
PLOD3-201ENST00000223127 EYA1Q99502 592 aa16.57■□□□□ 0.24
PLOD3-201ENST00000223127 HOXC9P31274 260 aa16.57■□□□□ 0.24
PLOD3-201ENST00000223127 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
PLOD3-201ENST00000223127 MCM10Q7L590 875 aa16.56■□□□□ 0.24
PLOD3-201ENST00000223127 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
PLOD3-201ENST00000223127 RRAGDQ9NQL2 400 aaPredicted RBP16.56■□□□□ 0.24
PLOD3-201ENST00000223127 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
PLOD3-201ENST00000223127 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
PLOD3-201ENST00000223127 FTSJ3Q8IY81 847 aaKnown RBP16.56■□□□□ 0.24
PLOD3-201ENST00000223127 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
PLOD3-201ENST00000223127 GNAI1P63096 354 aa16.55■□□□□ 0.24
PLOD3-201ENST00000223127 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
PLOD3-201ENST00000223127 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
PLOD3-201ENST00000223127 C19orf44Q9H6X5 657 aa16.55■□□□□ 0.24
PLOD3-201ENST00000223127 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
PLOD3-201ENST00000223127 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
PLOD3-201ENST00000223127 BECN1Q14457 450 aa16.53■□□□□ 0.24
PLOD3-201ENST00000223127 ANTXR1Q9H6X2 564 aa16.53■□□□□ 0.24
PLOD3-201ENST00000223127 TMEM94Q12767 1356 aa16.53■□□□□ 0.24
PLOD3-201ENST00000223127 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
PLOD3-201ENST00000223127 DDX17Q92841 729 aaKnown RBP16.53■□□□□ 0.24
PLOD3-201ENST00000223127 ATF3P18847 181 aa16.52■□□□□ 0.24
PLOD3-201ENST00000223127 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.24
PLOD3-201ENST00000223127 CFAP44Q96MT7 982 aa16.52■□□□□ 0.24
PLOD3-201ENST00000223127 TRIM27P14373 513 aa16.52■□□□□ 0.24
PLOD3-201ENST00000223127 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
PLOD3-201ENST00000223127 KDM4FA0A1W2PPD8 638 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms