RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 JMYQ8N9B5 988 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 PLEKHH1Q9ULM0 1364 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 ARHGAP25P42331 645 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 CFAP45Q9UL16 551 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 KIF5CO60282 957 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 KIF5BP33176 963 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 NUP133Q8WUM0 1156 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 NPHP1O15259 732 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 SYNE3Q6ZMZ3 975 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 ANKRD18BA2A2Z9 1011 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 TAX1BP1Q86VP1 789 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.07□□□□□ -1.12
RBM28-201ENST00000223073 TNMDQ9H2S6 317 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 TXLNAP40222 546 aa8.07□□□□□ -1.12
RBM28-201ENST00000223073 SKIDA1Q1XH10 827 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
RBM28-201ENST00000223073 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.06□□□□□ -1.12
RBM28-201ENST00000223073 SPATS2Q86XZ4 545 aaKnown RBP8.06□□□□□ -1.12
RBM28-201ENST00000223073 SPC24Q8NBT2 197 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 CCDC172P0C7W6 258 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 NAA25Q14CX7 972 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 EHBP1Q8NDI1 1231 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 DAAM2Q86T65 1068 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 LRRFIP2Q9Y608 721 aaKnown RBP8.06□□□□□ -1.12
RBM28-201ENST00000223073 RAB3GAP2Q9H2M9 1393 aa8.06□□□□□ -1.12
RBM28-201ENST00000223073 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 DHX16O60231 1041 aaKnown RBP8.05□□□□□ -1.12
RBM28-201ENST00000223073 MSL1Q68DK7 614 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 RSPH14Q9UHP6 348 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 OPA1O60313 960 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 PPFIA3O75145 1194 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 CCDC121Q6ZUS5 278 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 MAP2K1Q02750 393 aaPredicted RBP8.05□□□□□ -1.12
RBM28-201ENST00000223073 ANKRD1Q15327 319 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 PDILTQ8N807 584 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 VPS8Q8N3P4 1428 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 ROCK1Q13464 1354 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 OTUD6BQ8N6M0 293 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 CEP83Q9Y592 693 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 PLIN1O60240 522 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 ZFYP08048 801 aaPredicted RBP8.05□□□□□ -1.12
RBM28-201ENST00000223073 CAPN2P17655 700 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 TRIM29Q14134 588 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
RBM28-201ENST00000223073 DHX57Q6P158 1386 aaKnown RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 CCDC175P0C221 793 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 RNF187Q5TA31 235 aaPredicted RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 ADCY5O95622 1261 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 RTF1Q92541 710 aaKnown RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 SPATS2LQ9NUQ6 558 aaKnown RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 CCDC150Q8NCX0 1101 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 TTC36A6NLP5 189 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 LUC7L3O95232 432 aaKnown RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 CLNS1AP54105 237 aaKnown RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 GCC1Q96CN9 775 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 BIRC2Q13490 618 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 HSP90AB4PQ58FF6 505 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 HDXQ7Z353 690 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 PIP4K2BP78356 416 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 IBSPP21815 317 aaPredicted RBP8.04□□□□□ -1.12
RBM28-201ENST00000223073 POLD1P28340 1107 aa8.04□□□□□ -1.12
RBM28-201ENST00000223073 SMC1AQ14683 1233 aaKnown RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 ZBTB17Q13105 803 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 KLHL10Q6JEL2 608 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 HIP1O00291 1037 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 PPP2R5AQ15172 486 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 DNAI2Q9GZS0 605 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 SCAND2PQ9GZW5 306 aaPredicted RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 CCDC92Q53HC0 331 aaPredicted RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 BAZ1BQ9UIG0 1483 aaKnown RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 U2AF1L5P0DN76 240 aaPredicted RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 SLC8A1P32418 973 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 U2AF1Q01081 240 aaKnown RBP eCLIP8.03□□□□□ -1.12
RBM28-201ENST00000223073 API5Q9BZZ5 524 aaKnown RBP8.03□□□□□ -1.12
RBM28-201ENST00000223073 A0A0G2JS52 829 aa8.03□□□□□ -1.12
RBM28-201ENST00000223073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.03□□□□□ -1.124e-7■■■□□ 17.8
RBM28-201ENST00000223073 USH1CQ9Y6N9 552 aa8.02□□□□□ -1.12
RBM28-201ENST00000223073 SYCE3A1L190 88 aa8.02□□□□□ -1.12
RBM28-201ENST00000223073 SAFBQ15424 915 aaKnown RBP eCLIP8.02□□□□□ -1.12
RBM28-201ENST00000223073 LMNTD2Q8IXW0 634 aa8.02□□□□□ -1.12
RBM28-201ENST00000223073 USP25Q9UHP3 1055 aa8.02□□□□□ -1.12
RBM28-201ENST00000223073 NBPF8Q3BBV2 869 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 VCXQ9H320 206 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 ZKSCAN8Q15776 578 aaPredicted RBP8.02□□□□□ -1.13
RBM28-201ENST00000223073 CCDC30Q5VVM6 783 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 ZSCAN31Q96LW9 406 aaPredicted RBP8.02□□□□□ -1.13
RBM28-201ENST00000223073 SERPINC1P01008 464 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 LOC102724159A0A0B4J2E5 919 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
RBM28-201ENST00000223073 ARHGAP29Q52LW3 1261 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
RBM28-201ENST00000223073 CEP57Q86XR8 500 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 C10orf67Q8IYJ2 551 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 FAM184BQ9ULE4 1060 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 RLBP1P12271 317 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 WDR63Q8IWG1 891 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 NUP62CLQ9H1M0 184 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 ZNF500O60304 480 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms