RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CEP152O94986 1710 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 FYB1O15117 783 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 ABCC3O15438 1527 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 CLSTN1O94985 981 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 PSMD1Q99460 953 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 GNAI1P63096 354 aa12.98□□□□□ -0.33
VPS18-201ENST00000220509 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
VPS18-201ENST00000220509 TET3O43151 1660 aa12.98□□□□□ -0.33
VPS18-201ENST00000220509 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
VPS18-201ENST00000220509 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 ANKLE2Q86XL3 938 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS18-201ENST00000220509 PLEKHH1Q9ULM0 1364 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
VPS18-201ENST00000220509 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 CFAP74Q9C0B2 1584 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
VPS18-201ENST00000220509 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
VPS18-201ENST00000220509 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
VPS18-201ENST00000220509 ZBTB22O15209 634 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 CLCN1P35523 988 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 PSME1Q06323 249 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 GRPEL1Q9HAV7 217 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 MRE11P49959 708 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
VPS18-201ENST00000220509 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.33
VPS18-201ENST00000220509 EIF2S2P20042 333 aaKnown RBP12.96□□□□□ -0.34
VPS18-201ENST00000220509 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.34
VPS18-201ENST00000220509 KCNJ4P48050 445 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 SPHKAPQ2M3C7 1700 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
VPS18-201ENST00000220509 MAP7D2Q96T17 732 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 CGNQ9P2M7 1197 aaKnown RBP12.95□□□□□ -0.34
VPS18-201ENST00000220509 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 HMMRO75330 724 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 KIF1BO60333 1816 aa12.95□□□□□ -0.34
VPS18-201ENST00000220509 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 R3HCC1Q9Y3T6 440 aaKnown RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 ABCA6Q8N139 1617 aa12.94□□□□□ -0.34
VPS18-201ENST00000220509 RNF17Q9BXT8 1623 aaKnown RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 TSPYL4Q9UJ04 414 aa12.94□□□□□ -0.34
VPS18-201ENST00000220509 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
VPS18-201ENST00000220509 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
VPS18-201ENST00000220509 TRPM1Q7Z4N2 1603 aa12.94□□□□□ -0.34
VPS18-201ENST00000220509 PPRC1Q5VV67 1664 aaKnown RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 ZBTB9Q96C00 473 aa12.94□□□□□ -0.34
VPS18-201ENST00000220509 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
VPS18-201ENST00000220509 RARSP54136 660 aaKnown RBP12.93□□□□□ -0.34
VPS18-201ENST00000220509 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
VPS18-201ENST00000220509 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
VPS18-201ENST00000220509 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
VPS18-201ENST00000220509 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
VPS18-201ENST00000220509 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
VPS18-201ENST00000220509 TEFQ10587 303 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 FKBP5Q13451 457 aaPredicted RBP12.92□□□□□ -0.34
VPS18-201ENST00000220509 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 MPNDQ8N594 471 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 DDX49Q9Y6V7 483 aaKnown RBP12.92□□□□□ -0.34
VPS18-201ENST00000220509 METP08581 1390 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 KCNA6P17658 529 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
VPS18-201ENST00000220509 GBP4Q96PP9 640 aa12.92□□□□□ -0.34
VPS18-201ENST00000220509 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
VPS18-201ENST00000220509 PIK3C2GO75747 1445 aa12.91□□□□□ -0.34
VPS18-201ENST00000220509 ACEP12821 1306 aa12.91□□□□□ -0.34
VPS18-201ENST00000220509 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
VPS18-201ENST00000220509 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
VPS18-201ENST00000220509 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
VPS18-201ENST00000220509 FOXO3O43524 673 aa12.9□□□□□ -0.34
VPS18-201ENST00000220509 HSPA2P54652 639 aa12.9□□□□□ -0.34
VPS18-201ENST00000220509 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
VPS18-201ENST00000220509 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
VPS18-201ENST00000220509 ANKRD36BQ8N2N9 1353 aa12.9□□□□□ -0.34
VPS18-201ENST00000220509 FCHSD2O94868 740 aa12.9□□□□□ -0.34
VPS18-201ENST00000220509 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
VPS18-201ENST00000220509 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
VPS18-201ENST00000220509 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
VPS18-201ENST00000220509 FOXD4L6Q3SYB3 417 aaPredicted RBP12.89□□□□□ -0.35
VPS18-201ENST00000220509 FOXD4L3Q6VB84 417 aaPredicted RBP12.89□□□□□ -0.35
VPS18-201ENST00000220509 RILPL2Q969X0 211 aa12.89□□□□□ -0.35
VPS18-201ENST00000220509 MCCP23508 829 aa12.88□□□□□ -0.35
VPS18-201ENST00000220509 DMTNQ08495 405 aa12.88□□□□□ -0.35
VPS18-201ENST00000220509 TMEM57Q8N5G2 664 aa12.88□□□□□ -0.35
VPS18-201ENST00000220509 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
VPS18-201ENST00000220509 FRMPD1Q5SYB0 1578 aa12.87□□□□□ -0.35
VPS18-201ENST00000220509 NASPP49321 788 aaPredicted RBP12.87□□□□□ -0.35
VPS18-201ENST00000220509 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms