RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 GGNBP2Q9H3C7 697 aa11.95□□□□□ -0.5
TUBB1-201ENST00000217133 SHPRHQ149N8 1683 aa11.95□□□□□ -0.5
TUBB1-201ENST00000217133 LTKP29376 864 aa11.95□□□□□ -0.5
TUBB1-201ENST00000217133 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
TUBB1-201ENST00000217133 VGFO15240 615 aaPredicted RBP11.94□□□□□ -0.5
TUBB1-201ENST00000217133 SLC26A8Q96RN1 970 aa11.94□□□□□ -0.5
TUBB1-201ENST00000217133 MYOM2P54296 1465 aa11.94□□□□□ -0.5
TUBB1-201ENST00000217133 IL16Q14005 1332 aa11.94□□□□□ -0.5
TUBB1-201ENST00000217133 ALDH1L2Q3SY69 923 aa11.94□□□□□ -0.5
TUBB1-201ENST00000217133 RABEP1Q15276 862 aa11.93□□□□□ -0.5
TUBB1-201ENST00000217133 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
TUBB1-201ENST00000217133 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
TUBB1-201ENST00000217133 TXNDC2Q86VQ3 553 aa11.93□□□□□ -0.5
TUBB1-201ENST00000217133 KIAA1210Q9ULL0 1709 aa11.93□□□□□ -0.5
TUBB1-201ENST00000217133 NSD2O96028 1365 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 ZSCAN23Q3MJ62 389 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 ARID3AQ99856 593 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
TUBB1-201ENST00000217133 PLEKHF1Q96S99 279 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 PREX1Q8TCU6 1659 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
TUBB1-201ENST00000217133 DIAPH1O60610 1272 aaKnown RBP11.92□□□□□ -0.5
TUBB1-201ENST00000217133 HSPA2P54652 639 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
TUBB1-201ENST00000217133 MAP7D2Q96T17 732 aa11.92□□□□□ -0.5
TUBB1-201ENST00000217133 ANKRD36BQ8N2N9 1353 aa11.91□□□□□ -0.5
TUBB1-201ENST00000217133 IBTKQ9P2D0 1353 aaPredicted RBP11.91□□□□□ -0.5
TUBB1-201ENST00000217133 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
TUBB1-201ENST00000217133 PRPF40AO75400 957 aaKnown RBP11.91□□□□□ -0.5
TUBB1-201ENST00000217133 ZNF445P59923 1031 aa11.91□□□□□ -0.5
TUBB1-201ENST00000217133 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
TUBB1-201ENST00000217133 UQCRHLA0A096LP55 91 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 ZBTB7BO15156 539 aaPredicted RBP11.9□□□□□ -0.5
TUBB1-201ENST00000217133 UQCRHP07919 91 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 HS1BP3Q53T59 392 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 RBSNQ9H1K0 784 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 A2ML1A8K2U0 1454 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 PTMAP06454 111 aaKnown RBP11.9□□□□□ -0.5
TUBB1-201ENST00000217133 TERF1P54274 439 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
TUBB1-201ENST00000217133 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.51
TUBB1-201ENST00000217133 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
TUBB1-201ENST00000217133 ST18O60284 1047 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
TUBB1-201ENST00000217133 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
TUBB1-201ENST00000217133 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 RBM27Q9P2N5 1060 aaKnown RBP11.89□□□□□ -0.51
TUBB1-201ENST00000217133 PPIP5K1Q6PFW1 1433 aa11.89□□□□□ -0.51
TUBB1-201ENST00000217133 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
TUBB1-201ENST00000217133 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
TUBB1-201ENST00000217133 RIMS2Q9UQ26 1411 aa11.88□□□□□ -0.51
TUBB1-201ENST00000217133 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
TUBB1-201ENST00000217133 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
TUBB1-201ENST00000217133 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
TUBB1-201ENST00000217133 RIMS1Q86UR5 1692 aaKnown RBP11.88□□□□□ -0.51
TUBB1-201ENST00000217133 PIK3C2BO00750 1634 aa11.88□□□□□ -0.51
TUBB1-201ENST00000217133 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
TUBB1-201ENST00000217133 TERF2IPQ9NYB0 399 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 APBB1O00213 710 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 PKP1Q13835 747 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
TUBB1-201ENST00000217133 DNTTIP2Q5QJE6 756 aaKnown RBP11.87□□□□□ -0.51
TUBB1-201ENST00000217133 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
TUBB1-201ENST00000217133 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
TUBB1-201ENST00000217133 CCDC39Q9UFE4 941 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 FER1L4A9Z1Z3 1794 aa11.87□□□□□ -0.51
TUBB1-201ENST00000217133 KIF1BO60333 1816 aa11.86□□□□□ -0.51
TUBB1-201ENST00000217133 TMEM2Q9UHN6 1383 aa11.86□□□□□ -0.51
TUBB1-201ENST00000217133 SYCE3A1L190 88 aa11.86□□□□□ -0.51
TUBB1-201ENST00000217133 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
TUBB1-201ENST00000217133 MRPL50Q8N5N7 158 aaKnown RBP11.86□□□□□ -0.51
TUBB1-201ENST00000217133 PUS7Q96PZ0 661 aaKnown RBP11.86□□□□□ -0.51
TUBB1-201ENST00000217133 EID1Q9Y6B2 187 aa11.86□□□□□ -0.51
TUBB1-201ENST00000217133 PTPRMP28827 1452 aa11.86□□□□□ -0.51
TUBB1-201ENST00000217133 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
TUBB1-201ENST00000217133 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 TMEM131LA2VDJ0 1609 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 ADGRB2O60241 1585 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 FCHSD2O94868 740 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 PLEKHM2Q8IWE5 1019 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 ZGPATQ8N5A5 531 aaKnown RBP11.85□□□□□ -0.51
TUBB1-201ENST00000217133 C3P01024 1663 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 VAMP4O75379 141 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 MTERF4Q7Z6M4 381 aaKnown RBP11.85□□□□□ -0.51
TUBB1-201ENST00000217133 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 API5Q9BZZ5 524 aaKnown RBP11.85□□□□□ -0.51
TUBB1-201ENST00000217133 MYO5BQ9ULV0 1848 aa11.85□□□□□ -0.51
TUBB1-201ENST00000217133 FYB1O15117 783 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms