RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ZKSCAN2Q63HK3 967 aa10.25□□□□□ -0.77
HMGXB4-201ENST00000216106 FTSJ3Q8IY81 847 aaKnown RBP10.25□□□□□ -0.77
HMGXB4-201ENST00000216106 PEAK1Q9H792 1746 aa10.25□□□□□ -0.77
HMGXB4-201ENST00000216106 NGDNQ8NEJ9 315 aaKnown RBP10.24□□□□□ -0.77
HMGXB4-201ENST00000216106 SSH2Q76I76 1423 aa10.24□□□□□ -0.77
HMGXB4-201ENST00000216106 EIF4A2Q14240 407 aaKnown RBP10.24□□□□□ -0.77
HMGXB4-201ENST00000216106 DZIP1LQ8IYY4 767 aaKnown RBP10.24□□□□□ -0.77
HMGXB4-201ENST00000216106 TRIM27P14373 513 aa10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 MVPQ14764 893 aaKnown RBP10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 IPO9Q96P70 1041 aaKnown RBP10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 NOP58Q9Y2X3 529 aaKnown RBP10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 PCDHB15Q9Y5E8 787 aa10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 HSP90AB2PQ58FF8 381 aa10.23□□□□□ -0.77
HMGXB4-201ENST00000216106 PAK3O75914 559 aaPredicted RBP10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 SULT6B1Q6IMI4 303 aa10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 NOB1Q9ULX3 412 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 USP31Q70CQ4 1352 aa10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 PIK3C2AO00443 1686 aa10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 FMN2Q9NZ56 1722 aa10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 ATF7IPQ6VMQ6 1270 aa10.22□□□□□ -0.77
HMGXB4-201ENST00000216106 TTC21AQ8NDW8 1320 aa10.21□□□□□ -0.77
HMGXB4-201ENST00000216106 ZNF142P52746 1687 aaPredicted RBP10.21□□□□□ -0.77
HMGXB4-201ENST00000216106 DCTN1Q14203 1278 aa10.21□□□□□ -0.77
HMGXB4-201ENST00000216106 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.78
HMGXB4-201ENST00000216106 AAMPQ13685 434 aa10.21□□□□□ -0.78
HMGXB4-201ENST00000216106 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.78
HMGXB4-201ENST00000216106 RBM33Q96EV2 1170 aaKnown RBP10.21□□□□□ -0.78
HMGXB4-201ENST00000216106 KIF16BQ96L93 1317 aa10.21□□□□□ -0.78
HMGXB4-201ENST00000216106 CHD2O14647 1828 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 C8orf34Q49A92 452 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 MBIPQ9NS73 344 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 IFT57Q9NWB7 429 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 MAP3K19Q56UN5 1328 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 RGPD1P0DJD0 1748 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 GNAI1P63096 354 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 LMOD3Q0VAK6 560 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 FAM161AQ3B820 660 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 ADAMTSL3P82987 1691 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 ELL2O00472 640 aaPredicted RBP10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 TSPYL6Q8N831 410 aa10.2□□□□□ -0.78
HMGXB4-201ENST00000216106 ANKARQ7Z5J8 1434 aa10.19□□□□□ -0.78
HMGXB4-201ENST00000216106 ALDH1L2Q3SY69 923 aa10.19□□□□□ -0.78
HMGXB4-201ENST00000216106 NUTM2GQ5VZR2 741 aa10.19□□□□□ -0.78
HMGXB4-201ENST00000216106 ZNF853P0CG23 659 aa10.19□□□□□ -0.78
HMGXB4-201ENST00000216106 TMEM57Q8N5G2 664 aa10.19□□□□□ -0.78
HMGXB4-201ENST00000216106 ZBTB47Q9UFB7 747 aaPredicted RBP10.19□□□□□ -0.78
HMGXB4-201ENST00000216106 VAMP4O75379 141 aa10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 DDX19BQ9UMR2 479 aa10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 FLT4P35916 1363 aa10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 NLRP6P59044 892 aa10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 VIRMAQ69YN4 1812 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 MARF1Q9Y4F3 1742 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-201ENST00000216106 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 SBNO1A3KN83 1393 aa10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 MYT1Q01538 1121 aa10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 RWDD1Q9H446 243 aaPredicted RBP10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 SETD1BQ9UPS6 1966 aaKnown RBP10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 AMPHP49418 695 aa10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 TWISTNBQ3B726 338 aaPredicted RBP10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
HMGXB4-201ENST00000216106 MCM10Q7L590 875 aa10.16□□□□□ -0.78
HMGXB4-201ENST00000216106 C8orf58Q8NAV2 365 aa10.16□□□□□ -0.78
HMGXB4-201ENST00000216106 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
HMGXB4-201ENST00000216106 ARHGEF10O15013 1369 aa10.16□□□□□ -0.78
HMGXB4-201ENST00000216106 C14orf37Q86TY3 774 aa10.16□□□□□ -0.78
HMGXB4-201ENST00000216106 ABTB2Q8N961 1025 aa10.16□□□□□ -0.78
HMGXB4-201ENST00000216106 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
HMGXB4-201ENST00000216106 BRPF1P55201 1214 aaPredicted RBP10.15□□□□□ -0.79
HMGXB4-201ENST00000216106 ZBTB40Q9NUA8 1239 aa10.14□□□□□ -0.79
HMGXB4-201ENST00000216106 PHF8Q9UPP1 1060 aa10.14□□□□□ -0.79
HMGXB4-201ENST00000216106 FOXO3O43524 673 aa10.14□□□□□ -0.79
HMGXB4-201ENST00000216106 KRT24Q2M2I5 525 aa10.14□□□□□ -0.79
HMGXB4-201ENST00000216106 EYA1Q99502 592 aa10.14□□□□□ -0.79
HMGXB4-201ENST00000216106 USP54Q70EL1 1684 aa10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 KDRP35968 1356 aa10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 ADGRL3Q9HAR2 1447 aa10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 IGSF1Q8N6C5 1336 aa10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 MTHFSDQ2M296 383 aaKnown RBP10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 NPHP4O75161 1426 aaPredicted RBP10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 LTN1O94822 1766 aa10.13□□□□□ -0.79
HMGXB4-201ENST00000216106 HOXC9P31274 260 aa10.12□□□□□ -0.79
HMGXB4-201ENST00000216106 HDAC1Q13547 482 aaPredicted RBP10.12□□□□□ -0.79
HMGXB4-201ENST00000216106 ESCO1Q5FWF5 840 aa10.12□□□□□ -0.79
HMGXB4-201ENST00000216106 ARHGAP45Q92619 1136 aa10.12□□□□□ -0.79
HMGXB4-201ENST00000216106 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
HMGXB4-201ENST00000216106 CHL1O00533 1208 aa10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 MIS18AQ9NYP9 233 aa10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 NBR1Q14596 966 aa10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 CRB1P82279 1406 aa10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
HMGXB4-201ENST00000216106 ABCC4O15439 1325 aa10.1□□□□□ -0.79
HMGXB4-201ENST00000216106 SEC24BO95487 1268 aa10.1□□□□□ -0.79
HMGXB4-201ENST00000216106 NWD1Q149M9 1564 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms