RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 SSH2Q76I76 1423 aa10.71□□□□□ -0.7
EPB41L1-201ENST00000202028 DZIP1LQ8IYY4 767 aaKnown RBP10.71□□□□□ -0.7
EPB41L1-201ENST00000202028 ELL2O00472 640 aaPredicted RBP10.7□□□□□ -0.7
EPB41L1-201ENST00000202028 POLR3AO14802 1390 aaPredicted RBP10.7□□□□□ -0.7
EPB41L1-201ENST00000202028 TRPM3Q9HCF6 1732 aaPredicted RBP10.7□□□□□ -0.7
EPB41L1-201ENST00000202028 HSP90AA1P07900 732 aaKnown RBP10.7□□□□□ -0.7
EPB41L1-201ENST00000202028 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
EPB41L1-201ENST00000202028 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
EPB41L1-201ENST00000202028 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
EPB41L1-201ENST00000202028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.69□□□□□ -0.7
EPB41L1-201ENST00000202028 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
EPB41L1-201ENST00000202028 FBLN1P23142 703 aa10.68□□□□□ -0.7
EPB41L1-201ENST00000202028 NGEFQ8N5V2 710 aa10.68□□□□□ -0.7
EPB41L1-201ENST00000202028 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 RIPK4P57078 832 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 MAP2P11137 1827 aaKnown RBP10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 COL3A1P02461 1466 aaPredicted RBP10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 TBC1D2Q9BYX2 928 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 LNPKQ9C0E8 428 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
EPB41L1-201ENST00000202028 NOB1Q9ULX3 412 aaKnown RBP10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 USP19O94966 1318 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 KCNA6P17658 529 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 CDK19Q9BWU1 502 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 C22orf23Q9BZE7 217 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 CRYBG1Q9Y4K1 1723 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 SSH1Q8WYL5 1049 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 ALS2Q96Q42 1657 aa10.66□□□□□ -0.7
EPB41L1-201ENST00000202028 AMOTL2Q9Y2J4 779 aa10.65□□□□□ -0.7
EPB41L1-201ENST00000202028 RGPD1P0DJD0 1748 aa10.65□□□□□ -0.7
EPB41L1-201ENST00000202028 AATKQ6ZMQ8 1374 aa10.65□□□□□ -0.7
EPB41L1-201ENST00000202028 HSCBQ8IWL3 235 aa10.65□□□□□ -0.7
EPB41L1-201ENST00000202028 C1orf115Q9H7X2 142 aa10.65□□□□□ -0.7
EPB41L1-201ENST00000202028 TERF2IPQ9NYB0 399 aa10.65□□□□□ -0.7
EPB41L1-201ENST00000202028 HMOX1P09601 288 aa10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 TRIM27P14373 513 aa10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 ABCC6O95255 1503 aa10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 USP6P35125 1406 aa10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 TMEM57Q8N5G2 664 aa10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
EPB41L1-201ENST00000202028 OVOS2A0A0J9YW53 1432 aa10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 OVOS2Q6IE36 1432 aa10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 TMPOP42166 694 aaKnown RBP10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 APBB1O00213 710 aa10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 TBC1D32Q96NH3 1257 aa10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 HSP90AB1P08238 724 aaKnown RBP10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 PNPLA6Q8IY17 1366 aa10.63□□□□□ -0.71
EPB41L1-201ENST00000202028 CDK12Q9NYV4 1490 aaPredicted RBP10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 ANKRD45Q5TZF3 282 aa10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 DDX19BQ9UMR2 479 aa10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 CCDC61Q9Y6R9 512 aa10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 PRR36Q9H6K5 1346 aa10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 WAPLQ7Z5K2 1190 aa10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
EPB41L1-201ENST00000202028 GOLGA6L3A6NEY3 463 aa10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 CAMTA1Q9Y6Y1 1673 aa10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 HDGFL2Q7Z4V5 671 aaPredicted RBP10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 NHSL1Q5SYE7 1610 aa10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 SLIT3O75094 1523 aa10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 SOX12O15370 315 aa10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 L1TD1Q5T7N2 865 aaKnown RBP10.61□□□□□ -0.71
EPB41L1-201ENST00000202028 TTC21AQ8NDW8 1320 aa10.6□□□□□ -0.71
EPB41L1-201ENST00000202028 IQSEC2Q5JU85 1478 aa10.6□□□□□ -0.71
EPB41L1-201ENST00000202028 KIF24Q5T7B8 1368 aa10.6□□□□□ -0.71
EPB41L1-201ENST00000202028 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
EPB41L1-201ENST00000202028 NUDT16Q96DE0 195 aaKnown RBP10.6□□□□□ -0.71
EPB41L1-201ENST00000202028 CABP1Q9NZU7 370 aa10.59□□□□□ -0.71
EPB41L1-201ENST00000202028 SLC26A8Q96RN1 970 aa10.59□□□□□ -0.71
EPB41L1-201ENST00000202028 LTN1O94822 1766 aa10.58□□□□□ -0.71
EPB41L1-201ENST00000202028 PEAK1Q9H792 1746 aa10.58□□□□□ -0.72
EPB41L1-201ENST00000202028 MCM4P33991 863 aa10.58□□□□□ -0.72
EPB41L1-201ENST00000202028 CHMP5Q9NZZ3 219 aa10.58□□□□□ -0.72
EPB41L1-201ENST00000202028 FAM208AQ9UK61 1670 aaKnown RBP10.58□□□□□ -0.72
EPB41L1-201ENST00000202028 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
EPB41L1-201ENST00000202028 TRAK2O60296 914 aa10.58□□□□□ -0.72
EPB41L1-201ENST00000202028 PANK2Q9BZ23 570 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 FYB1O15117 783 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 NFAT5O94916 1531 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 ABCA3Q99758 1704 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 NCLP19338 710 aaKnown RBP10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 AAMPQ13685 434 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 PLPPR3Q6T4P5 718 aa10.57□□□□□ -0.72
EPB41L1-201ENST00000202028 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
EPB41L1-201ENST00000202028 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
EPB41L1-201ENST00000202028 LTBP4Q8N2S1 1624 aa10.55□□□□□ -0.72
EPB41L1-201ENST00000202028 C1orf167Q5SNV9 1468 aa10.55□□□□□ -0.72
EPB41L1-201ENST00000202028 PNNQ9H307 717 aaKnown RBP10.55□□□□□ -0.72
EPB41L1-201ENST00000202028 KIF16BQ96L93 1317 aa10.55□□□□□ -0.72
EPB41L1-201ENST00000202028 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms