RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 MCM5P33992 734 aa18.39■□□□□ 0.53
TMEM38A-201ENST00000187762 TMEM51Q9NW97 253 aa18.39■□□□□ 0.53
TMEM38A-201ENST00000187762 DDX49Q9Y6V7 483 aaKnown RBP18.39■□□□□ 0.53
TMEM38A-201ENST00000187762 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
TMEM38A-201ENST00000187762 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
TMEM38A-201ENST00000187762 ZNF445P59923 1031 aa18.38■□□□□ 0.53
TMEM38A-201ENST00000187762 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
TMEM38A-201ENST00000187762 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
TMEM38A-201ENST00000187762 PREX1Q8TCU6 1659 aa18.38■□□□□ 0.53
TMEM38A-201ENST00000187762 ABCC11Q96J66 1382 aa18.38■□□□□ 0.53
TMEM38A-201ENST00000187762 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
TMEM38A-201ENST00000187762 PRAM1Q96QH2 718 aa18.37■□□□□ 0.53
TMEM38A-201ENST00000187762 TMEM131LA2VDJ0 1609 aa18.37■□□□□ 0.53
TMEM38A-201ENST00000187762 CBX1P83916 185 aa18.36■□□□□ 0.53
TMEM38A-201ENST00000187762 IPO4Q8TEX9 1081 aaKnown RBP18.36■□□□□ 0.53
TMEM38A-201ENST00000187762 PTPRMP28827 1452 aa18.36■□□□□ 0.53
TMEM38A-201ENST00000187762 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
TMEM38A-201ENST00000187762 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
TMEM38A-201ENST00000187762 RBSNQ9H1K0 784 aa18.35■□□□□ 0.53
TMEM38A-201ENST00000187762 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
TMEM38A-201ENST00000187762 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
TMEM38A-201ENST00000187762 SSFA2P28290 1259 aa18.34■□□□□ 0.53
TMEM38A-201ENST00000187762 MYRIPQ8NFW9 859 aa18.34■□□□□ 0.53
TMEM38A-201ENST00000187762 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
TMEM38A-201ENST00000187762 FYB1O15117 783 aa18.33■□□□□ 0.53
TMEM38A-201ENST00000187762 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.53
TMEM38A-201ENST00000187762 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
TMEM38A-201ENST00000187762 CLEC17AQ6ZS10 378 aa18.33■□□□□ 0.52
TMEM38A-201ENST00000187762 ZNF710Q8N1W2 664 aa18.33■□□□□ 0.52
TMEM38A-201ENST00000187762 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
TMEM38A-201ENST00000187762 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
TMEM38A-201ENST00000187762 ANKRD26Q9UPS8 1709 aa18.32■□□□□ 0.52
TMEM38A-201ENST00000187762 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
TMEM38A-201ENST00000187762 TMPOP42166 694 aaKnown RBP18.31■□□□□ 0.52
TMEM38A-201ENST00000187762 ZSCAN23Q3MJ62 389 aa18.31■□□□□ 0.52
TMEM38A-201ENST00000187762 CCDC39Q9UFE4 941 aa18.31■□□□□ 0.52
TMEM38A-201ENST00000187762 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
TMEM38A-201ENST00000187762 BAG4O95429 457 aaKnown RBP18.31■□□□□ 0.52
TMEM38A-201ENST00000187762 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
TMEM38A-201ENST00000187762 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
TMEM38A-201ENST00000187762 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
TMEM38A-201ENST00000187762 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 CLTCQ00610 1675 aaKnown RBP18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 MVPQ14764 893 aaKnown RBP18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 TAF7LQ5H9L4 462 aa18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 ZKSCAN2Q63HK3 967 aa18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
TMEM38A-201ENST00000187762 FBLN1P23142 703 aa18.28■□□□□ 0.52
TMEM38A-201ENST00000187762 TSC1Q92574 1164 aa18.28■□□□□ 0.52
TMEM38A-201ENST00000187762 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
TMEM38A-201ENST00000187762 ALKQ9UM73 1620 aa18.28■□□□□ 0.52
TMEM38A-201ENST00000187762 CDK19Q9BWU1 502 aa18.28■□□□□ 0.52
TMEM38A-201ENST00000187762 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
TMEM38A-201ENST00000187762 TAF3Q5VWG9 929 aa18.27■□□□□ 0.52
TMEM38A-201ENST00000187762 DZIP1LQ8IYY4 767 aaKnown RBP18.27■□□□□ 0.52
TMEM38A-201ENST00000187762 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
TMEM38A-201ENST00000187762 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.51
TMEM38A-201ENST00000187762 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.51
TMEM38A-201ENST00000187762 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
TMEM38A-201ENST00000187762 STAG3Q9UJ98 1225 aa18.26■□□□□ 0.51
TMEM38A-201ENST00000187762 KIF20BQ96Q89 1820 aa18.26■□□□□ 0.51
TMEM38A-201ENST00000187762 VGLL3A8MV65 326 aa18.25■□□□□ 0.51
TMEM38A-201ENST00000187762 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
TMEM38A-201ENST00000187762 TRIM27P14373 513 aa18.25■□□□□ 0.51
TMEM38A-201ENST00000187762 ZNF830Q96NB3 372 aaPredicted RBP18.25■□□□□ 0.51
TMEM38A-201ENST00000187762 DIAPH1O60610 1272 aaKnown RBP18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 GTF2F1P35269 517 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 PRIMPOLQ96LW4 560 aa18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 KIF2CQ99661 725 aa18.24■□□□□ 0.51
TMEM38A-201ENST00000187762 MCTP1Q6DN14 999 aa18.23■□□□□ 0.51
TMEM38A-201ENST00000187762 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
TMEM38A-201ENST00000187762 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
TMEM38A-201ENST00000187762 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
TMEM38A-201ENST00000187762 MED14O60244 1454 aa18.23■□□□□ 0.51
TMEM38A-201ENST00000187762 DNTTIP2Q5QJE6 756 aaKnown RBP18.23■□□□□ 0.51
TMEM38A-201ENST00000187762 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
TMEM38A-201ENST00000187762 LMBRD1Q9NUN5 540 aa18.22■□□□□ 0.51
TMEM38A-201ENST00000187762 CYB5RLQ6IPT4 315 aa18.22■□□□□ 0.51
TMEM38A-201ENST00000187762 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
TMEM38A-201ENST00000187762 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
TMEM38A-201ENST00000187762 CT47B1P0C2W7 299 aaPredicted RBP18.21■□□□□ 0.51
TMEM38A-201ENST00000187762 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
TMEM38A-201ENST00000187762 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
TMEM38A-201ENST00000187762 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
TMEM38A-201ENST00000187762 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
TMEM38A-201ENST00000187762 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
TMEM38A-201ENST00000187762 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
TMEM38A-201ENST00000187762 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
TMEM38A-201ENST00000187762 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.19■□□□□ 0.5
TMEM38A-201ENST00000187762 TMEM57Q8N5G2 664 aa18.19■□□□□ 0.5
TMEM38A-201ENST00000187762 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
TMEM38A-201ENST00000187762 ZBTB22O15209 634 aa18.18■□□□□ 0.5
TMEM38A-201ENST00000187762 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
TMEM38A-201ENST00000187762 LRSAM1Q6UWE0 723 aa18.18■□□□□ 0.5
TMEM38A-201ENST00000187762 MAP2P11137 1827 aaKnown RBP18.18■□□□□ 0.5
TMEM38A-201ENST00000187762 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms