RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 NLRP6P59044 892 aa18.55■□□□□ 0.56
RTFDC1-201ENST00000023939 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
RTFDC1-201ENST00000023939 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
RTFDC1-201ENST00000023939 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
RTFDC1-201ENST00000023939 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
RTFDC1-201ENST00000023939 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
RTFDC1-201ENST00000023939 C19orf44Q9H6X5 657 aa18.52■□□□□ 0.56
RTFDC1-201ENST00000023939 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.55
RTFDC1-201ENST00000023939 C14orf37Q86TY3 774 aa18.52■□□□□ 0.55
RTFDC1-201ENST00000023939 ABTB2Q8N961 1025 aa18.52■□□□□ 0.55
RTFDC1-201ENST00000023939 DCCP43146 1447 aa18.51■□□□□ 0.55
RTFDC1-201ENST00000023939 RTL1A6NKG5 1358 aa18.51■□□□□ 0.55
RTFDC1-201ENST00000023939 KDRP35968 1356 aa18.51■□□□□ 0.55
RTFDC1-201ENST00000023939 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
RTFDC1-201ENST00000023939 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
RTFDC1-201ENST00000023939 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
RTFDC1-201ENST00000023939 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 IFT57Q9NWB7 429 aa18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 ZNF853P0CG23 659 aa18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 AMPHP49418 695 aa18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 PSME1Q06323 249 aa18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
RTFDC1-201ENST00000023939 C1orf167Q5SNV9 1468 aa18.48■□□□□ 0.55
RTFDC1-201ENST00000023939 AAMPQ13685 434 aa18.48■□□□□ 0.55
RTFDC1-201ENST00000023939 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
RTFDC1-201ENST00000023939 MST1RQ04912 1400 aa18.48■□□□□ 0.55
RTFDC1-201ENST00000023939 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
RTFDC1-201ENST00000023939 NFAT5O94916 1531 aa18.47■□□□□ 0.55
RTFDC1-201ENST00000023939 GNAI1P63096 354 aa18.47■□□□□ 0.55
RTFDC1-201ENST00000023939 SOX12O15370 315 aa18.46■□□□□ 0.55
RTFDC1-201ENST00000023939 HOXC9P31274 260 aa18.46■□□□□ 0.55
RTFDC1-201ENST00000023939 DLG5Q8TDM6 1919 aa18.46■□□□□ 0.55
RTFDC1-201ENST00000023939 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 STRCP1A6NGW2 1772 aa18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 ORAI2Q96SN7 254 aa18.45■□□□□ 0.54
RTFDC1-201ENST00000023939 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
RTFDC1-201ENST00000023939 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
RTFDC1-201ENST00000023939 LMTK3Q96Q04 1460 aa18.44■□□□□ 0.54
RTFDC1-201ENST00000023939 TRPM3Q9HCF6 1732 aaPredicted RBP18.44■□□□□ 0.54
RTFDC1-201ENST00000023939 MS4A1P11836 297 aa18.43■□□□□ 0.54
RTFDC1-201ENST00000023939 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
RTFDC1-201ENST00000023939 NUTM2GQ5VZR2 741 aa18.43■□□□□ 0.54
RTFDC1-201ENST00000023939 EYA1Q99502 592 aa18.43■□□□□ 0.54
RTFDC1-201ENST00000023939 SLIT3O75094 1523 aa18.43■□□□□ 0.54
RTFDC1-201ENST00000023939 ZKSCAN2Q63HK3 967 aa18.42■□□□□ 0.54
RTFDC1-201ENST00000023939 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
RTFDC1-201ENST00000023939 IP6K1Q92551 441 aa18.42■□□□□ 0.54
RTFDC1-201ENST00000023939 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
RTFDC1-201ENST00000023939 SSH1Q8WYL5 1049 aa18.41■□□□□ 0.54
RTFDC1-201ENST00000023939 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
RTFDC1-201ENST00000023939 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
RTFDC1-201ENST00000023939 USP19O94966 1318 aa18.41■□□□□ 0.54
RTFDC1-201ENST00000023939 FOXO3O43524 673 aa18.4■□□□□ 0.54
RTFDC1-201ENST00000023939 HSPA2P54652 639 aa18.4■□□□□ 0.54
RTFDC1-201ENST00000023939 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
RTFDC1-201ENST00000023939 SMC4Q9NTJ3 1288 aa18.4■□□□□ 0.54
RTFDC1-201ENST00000023939 ATF3P18847 181 aa18.4■□□□□ 0.54
RTFDC1-201ENST00000023939 MBIPQ9NS73 344 aa18.4■□□□□ 0.54
RTFDC1-201ENST00000023939 LTN1O94822 1766 aa18.39■□□□□ 0.53
RTFDC1-201ENST00000023939 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
RTFDC1-201ENST00000023939 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
RTFDC1-201ENST00000023939 TCERG1O14776 1098 aaKnown RBP18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 HTATSF1O43719 755 aaKnown RBP18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 COG6Q9Y2V7 657 aa18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 STRCQ7RTU9 1775 aa18.38■□□□□ 0.53
RTFDC1-201ENST00000023939 VAMP4O75379 141 aa18.37■□□□□ 0.53
RTFDC1-201ENST00000023939 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
RTFDC1-201ENST00000023939 FAM83GA6ND36 823 aa18.37■□□□□ 0.53
RTFDC1-201ENST00000023939 RLBP1P12271 317 aa18.37■□□□□ 0.53
RTFDC1-201ENST00000023939 LAS1LQ9Y4W2 734 aaKnown RBP18.37■□□□□ 0.53
RTFDC1-201ENST00000023939 CHL1O00533 1208 aa18.36■□□□□ 0.53
RTFDC1-201ENST00000023939 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-201ENST00000023939 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-201ENST00000023939 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-201ENST00000023939 CRB1P82279 1406 aa18.36■□□□□ 0.53
RTFDC1-201ENST00000023939 ALS2Q96Q42 1657 aa18.36■□□□□ 0.53
RTFDC1-201ENST00000023939 GCP02774 474 aa18.35■□□□□ 0.53
RTFDC1-201ENST00000023939 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
RTFDC1-201ENST00000023939 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
RTFDC1-201ENST00000023939 MSH6P52701 1360 aa18.35■□□□□ 0.53
RTFDC1-201ENST00000023939 MVPQ14764 893 aaKnown RBP18.35■□□□□ 0.53
RTFDC1-201ENST00000023939 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
RTFDC1-201ENST00000023939 TRIM27P14373 513 aa18.34■□□□□ 0.53
RTFDC1-201ENST00000023939 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
RTFDC1-201ENST00000023939 ARHGAP45Q92619 1136 aa18.34■□□□□ 0.53
RTFDC1-201ENST00000023939 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
RTFDC1-201ENST00000023939 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
RTFDC1-201ENST00000023939 TNNQ9UQP3 1299 aa18.33■□□□□ 0.52
RTFDC1-201ENST00000023939 NOB1Q9ULX3 412 aaKnown RBP18.32■□□□□ 0.52
RTFDC1-201ENST00000023939 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
RTFDC1-201ENST00000023939 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
RTFDC1-201ENST00000023939 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms