RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PIGNO95427 931 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 NDST2P52849 883 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 ELP6Q0PNE2 266 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 GRM3Q14832 879 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 UGP2Q16851 508 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 FAXCQ5TGI0 409 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 ZNF248Q8NDW4 579 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 GLMNQ92990 594 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 GRAMD1AQ96CP6 724 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 EXOC2Q96KP1 924 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 SYT11Q9BT88 431 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 LRRC61Q9BV99 259 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 CLPBQ9H078 707 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 SUV39H2Q9H5I1 410 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 DONSONQ9NYP3 566 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 TAS2R14Q9NYV8 317 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 KALRNO60229 2985 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 TMEM110-MUSTN1A8MSY1 372 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 J3KR12 359 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 TK2O00142 265 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 YY2O15391 372 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 BUB1BO60566 1050 aaPredicted RBP18.64■□□□□ 0.57
CLN6-220ENST00000637450 PRAMEF11O60813 436 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 ANXA6P08133 673 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 TSHRP16473 764 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 DESP17661 470 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 TNFAIP3P21580 790 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 XPAP23025 273 aaPredicted RBP18.64■□□□□ 0.57
CLN6-220ENST00000637450 RPIAP49247 311 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 PEX5P50542 639 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 PCBP4P57723 403 aaKnown RBP18.64■□□□□ 0.57
CLN6-220ENST00000637450 TPI1P60174 286 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 ERVPABLB-1P60509 514 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 PPARDQ03181 441 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 MAMLD1Q13495 774 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 LRRC14Q15048 493 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 IRF4Q15306 451 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 WSCD2Q2TBF2 565 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 PERM1Q5SV97 790 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 C6orf132Q5T0Z8 1188 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 SLC35F3Q8IY50 421 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 ZNF641Q96N77 438 aaPredicted RBP18.64■□□□□ 0.57
CLN6-220ENST00000637450 LGMNQ99538 433 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 NCAPGQ9BPX3 1015 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 PCDH12Q9NPG4 1184 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 GPATCH2LQ9NWQ4 482 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 COQ6Q9Y2Z9 468 aa18.64■□□□□ 0.57
CLN6-220ENST00000637450 MUSKO15146 869 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 ATXN7O15265 892 aaPredicted RBP18.63■□□□□ 0.57
CLN6-220ENST00000637450 ATP1A3P13637 1013 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 PLEKHA7Q6IQ23 1121 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 PPP1R2P3Q6NXS1 205 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 BRAT1Q6PJG6 821 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 IGF2-ASQ6U949 168 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 GPR155Q7Z3F1 870 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 ARFGAP1Q8N6T3 406 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 LSM14AQ8ND56 463 aaKnown RBP18.63■□□□□ 0.57
CLN6-220ENST00000637450 CELF6Q96J87 481 aaKnown RBP18.63■□□□□ 0.57
CLN6-220ENST00000637450 GBP4Q96PP9 640 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 SLC39A8Q9C0K1 460 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 ASCL3Q9NQ33 180 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 AP4E1Q9UPM8 1137 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 MGAQ8IWI9 3026 aa18.63■□□□□ 0.57
CLN6-220ENST00000637450 A0A1W2PNU3 283 aaPredicted RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 EIF3CLB5ME19 914 aaKnown RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 TEX33O43247 280 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 TCEA3O75764 348 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 C6P13671 934 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 PSMA2P25787 234 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 CSNK1DP48730 415 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 PAPOLAP51003 745 aaKnown RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 BLKP51451 505 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 HK3P52790 923 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 AGERQ15109 404 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 CA9Q16790 459 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 ERMARDQ5T6L9 678 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 ERAP2Q6P179 960 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 CRTC1Q6UUV9 634 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 RBM44Q6ZP01 1051 aaKnown RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 CAMK1DQ8IU85 385 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 FSTL5Q8N475 847 aaPredicted RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 SLC39A7Q92504 469 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 NAT6Q93015 286 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 ATXN7L3BQ96GX2 97 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 NAF1Q96HR8 494 aaKnown RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 TUBGCP5Q96RT8 1024 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 EIF3CQ99613 913 aaKnown RBP18.62■□□□□ 0.57
CLN6-220ENST00000637450 PADI4Q9UM07 663 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 ENTPD2Q9Y5L3 495 aa18.62■□□□□ 0.57
CLN6-220ENST00000637450 TEX51A0A1B0GUA7 166 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 TMEM191CA6NGB0 347 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 ARHGAP42A6NI28 874 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 TMCO5BA8MYB1 307 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 EEF2KO00418 725 aaKnown RBP18.61■□□□□ 0.57
CLN6-220ENST00000637450 CELA2BP08218 269 aaPredicted RBP18.61■□□□□ 0.57
CLN6-220ENST00000637450 MMP12P39900 470 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 RGRP47804 291 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 LIG3P49916 1009 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms