RNA–Protein interactions for RNA: ENST00000637128.1

LINC00959-202, Transcript of HCG1648656, isoform CRA_a, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINC00959, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-202ENST00000637128 TMEM9BQ9NQ34 198 aa12.77□□□□□ -0.37
LINC00959-202ENST00000637128 AASDHPPTQ9NRN7 309 aa12.77□□□□□ -0.37
LINC00959-202ENST00000637128 FNDC3AQ9Y2H6 1198 aaKnown RBP12.77□□□□□ -0.37
LINC00959-202ENST00000637128 KNL1Q8NG31 2342 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 MATN3O15232 486 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 AP1G1O43747 822 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 CST8O60676 142 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 CTNNA2P26232 953 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 GRIA4P48058 902 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 CSNK1DP48730 415 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 LIMK1P53667 647 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 CLDN2P57739 230 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 RACK1P63244 317 aaKnown RBP12.76□□□□□ -0.37
LINC00959-202ENST00000637128 IL9RQ01113 521 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 RAD51Q06609 339 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 PPIDQ08752 370 aaKnown RBP12.76□□□□□ -0.37
LINC00959-202ENST00000637128 TRAF2Q12933 501 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
LINC00959-202ENST00000637128 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 PRAMEF14Q5SWL7 426 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 MARC1Q5VT66 337 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 GCNT7Q6ZNI0 430 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 RABEPKQ7Z6M1 372 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 TTC7BQ86TV6 843 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 VSIG1Q86XK7 387 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 CCDC13Q8IYE1 715 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 TMEM145Q8NBT3 493 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 CCNYQ8ND76 341 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 ECHDC3Q96DC8 303 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 SMIM14Q96QK8 99 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 TUBGCP5Q96RT8 1024 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 WRAP53Q9BUR4 548 aaKnown RBP12.76□□□□□ -0.37
LINC00959-202ENST00000637128 ATP13A3Q9H7F0 1226 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 PCDH12Q9NPG4 1184 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 DKK3Q9UBP4 350 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 ANKRD6Q9Y2G4 727 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 COQ6Q9Y2Z9 468 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 TTLL3Q9Y4R7 772 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 PCDHGC4Q9Y5F7 938 aa12.76□□□□□ -0.37
LINC00959-202ENST00000637128 A0A0U1RQS6 177 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 NEMP1O14524 444 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 TM4SF5O14894 197 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 ARHGAP6O43182 974 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 FOXD2O60548 495 aaPredicted RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 MMP20O60882 483 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 CCNB1P14635 433 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 CCNCP24863 283 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 SERPINA4P29622 427 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 PEX5P50542 639 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 RENBPP51606 427 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 AP1S1P61966 158 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 BCL2L1Q07817 233 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 NIPAL4Q0D2K0 466 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 RALGDSQ12967 914 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 ZNF211Q13398 564 aaPredicted RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 UGP2Q16851 508 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 HLA-BQ31612 363 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 SETMARQ53H47 684 aaPredicted RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 TFDP3Q5H9I0 405 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 ADAT2Q7Z6V5 191 aaKnown RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 EXD1Q8NHP7 514 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 PDCD6IPQ8WUM4 868 aaKnown RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 FAM118BQ9BPY3 351 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 MAK16Q9BXY0 300 aaKnown RBP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 GAREM1Q9H706 876 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 C10orf88Q9H8K7 445 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 RBM22Q9NW64 420 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00959-202ENST00000637128 SEPT10Q9P0V9 454 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 GUCA1BQ9UMX6 200 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 PCDHA3Q9Y5H8 950 aa12.75□□□□□ -0.37
LINC00959-202ENST00000637128 GOLGA8CPA6NN73 597 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 A8MX80 341 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 GIPC1O14908 333 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 VILLO15195 856 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 DDX3YO15523 660 aaKnown RBP12.74□□□□□ -0.37
LINC00959-202ENST00000637128 ZRANB2O95218 330 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00959-202ENST00000637128 PAK4O96013 591 aaPredicted RBP12.74□□□□□ -0.37
LINC00959-202ENST00000637128 JCHAINP01591 159 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 SYPP08247 313 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 PYGMP11217 842 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 MX2P20592 715 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 CD38P28907 300 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
LINC00959-202ENST00000637128 MMP12P39900 470 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 CTSKP43235 329 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
LINC00959-202ENST00000637128 RPS21P63220 83 aaKnown RBP12.74□□□□□ -0.37
LINC00959-202ENST00000637128 ITKQ08881 620 aa12.74□□□□□ -0.37
LINC00959-202ENST00000637128 AP1B1Q10567 949 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms