RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 FIGNQ5HY92 759 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 ZCCHC8Q6NZY4 707 aaKnown RBP18.1■□□□□ 0.49
PNKP-225ENST00000636214 KDM7AQ6ZMT4 941 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 HNRNPLLQ8WVV9 542 aaKnown RBP18.1■□□□□ 0.49
PNKP-225ENST00000636214 RFFLQ8WZ73 363 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 PEBP4Q96S96 227 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 SLC39A8Q9C0K1 460 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 PDFQ9HBH1 243 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 DOLKQ9UPQ8 538 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 SYCE3A1L190 88 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 SPINT1O43278 529 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 LZTS3O60299 673 aaPredicted RBP18.09■□□□□ 0.49
PNKP-225ENST00000636214 LRCH4O75427 683 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 MT-CO3P00414 261 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 HTR1BP28222 390 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 PCK1P35558 622 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 BLKP51451 505 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 RENBPP51606 427 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 UBASH3AP57075 661 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 BCL2L1Q07817 233 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 RFTN1Q14699 578 aaPredicted RBP18.09■□□□□ 0.49
PNKP-225ENST00000636214 NR1I3Q14994 352 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 ACAP1Q15027 740 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 LRRC14Q15048 493 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 IQCB1Q15051 598 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 UGP2Q16851 508 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 DEFB133Q30KQ1 61 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 TMEM52BQ4KMG9 183 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 FAXCQ5TGI0 409 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 E4F1Q66K89 784 aaPredicted RBP18.09■□□□□ 0.49
PNKP-225ENST00000636214 MACC1Q6ZN28 852 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 LRRC69Q6ZNQ3 347 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 SRLQ86TD4 932 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 PHACTR4Q8IZ21 702 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 CACTIN-AS1Q8N1I8 211 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 LZTR1Q8N653 840 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 FAM181AQ8N9Y4 354 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 ATL2Q8NHH9 583 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 MAPK15Q8TD08 544 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 CENPTQ96BT3 561 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 IQCDQ96DY2 449 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 DEPDC7Q96QD5 511 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 SCUBE2Q9NQ36 999 aa18.09■□□□□ 0.49
PNKP-225ENST00000636214 ANKRD36A6QL64 1941 aa18.08■□□□□ 0.49
PNKP-225ENST00000636214 TMEM110-MUSTN1A8MSY1 372 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 ANXA6P08133 673 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 EIF4A3P38919 411 aaKnown RBP18.08■□□□□ 0.48
PNKP-225ENST00000636214 CSNK1DP48730 415 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 HCAR3P49019 387 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 RPIAP49247 311 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 FANCCQ00597 558 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 PPARDQ03181 441 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 ZNF235Q14590 738 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 IRF4Q15306 451 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 COL28A1Q2UY09 1125 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 BOLA3Q53S33 107 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 PRRT3Q5FWE3 981 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 BBS5Q8N3I7 341 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 IFI44Q8TCB0 444 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 NSMCE1Q8WV22 266 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 TRIM7Q9C029 511 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 CBX8Q9HC52 389 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 ATP8A1Q9Y2Q0 1164 aa18.08■□□□□ 0.48
PNKP-225ENST00000636214 A0A1W2PQJ5 194 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 TSPAN11A1L157 253 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 CPED1A4D0V7 1026 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 RRP8O43159 456 aaKnown RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 OPA1O60313 960 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 TPM3P06753 285 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 C6P13671 934 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 ITIH2P19823 946 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 PTMSP20962 102 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 NFKBIAP25963 317 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 ABCG1P45844 678 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 POLR2LP62875 67 aaKnown RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 IL10RBQ08334 325 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 EIF2B5Q13144 721 aaKnown RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 PIGHQ14442 188 aaPredicted RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 NR0B2Q15466 257 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 NFKBIBQ15653 356 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 CDKN3Q16667 212 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 SMTNL2Q2TAL5 461 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 TMCO4Q5TGY1 634 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 LUZP1Q86V48 1076 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 CAMK1DQ8IU85 385 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 DCBLD1Q8N8Z6 715 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 TP53I13Q8NBR0 393 aaPredicted RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 TSEN2Q8NCE0 465 aaKnown RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 SCG3Q8WXD2 468 aaKnown RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 HSPH1Q92598 858 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 SYN2Q92777 582 aaPredicted RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 FUCA2Q9BTY2 467 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 ISCUQ9H1K1 167 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 CWC15Q9P013 229 aaKnown RBP18.07■□□□□ 0.48
PNKP-225ENST00000636214 SEPT3Q9UH03 358 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 SALL4Q9UJQ4 1053 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms