RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ABCG1P45844 678 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PAPOLAP51003 745 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PDX1P52945 283 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 AIF1P55008 147 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 RALGDSQ12967 914 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 TBC1D25Q3MII6 688 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 ZCCHC8Q6NZY4 707 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PCSK4Q6UW60 755 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 ZSCAN30Q86W11 494 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PHACTR4Q8IZ21 702 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PELI3Q8N2H9 469 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PLA2G15Q8NCC3 412 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PRR11Q96HE9 360 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 HIC2Q96JB3 615 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PCDH12Q9NPG4 1184 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 ASCL3Q9NQ33 180 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 PCSK1NQ9UHG2 260 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 RABGEF1Q9UJ41 708 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
SOX2-OT-241ENST00000626948 TTC24A2A3L6 582 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 NEMP2A6NFY4 417 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 YY2O15391 372 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 FGF10O15520 208 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 CSO75390 466 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 LRCH4O75427 683 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 PRB1P04280 392 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 C6P13671 934 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 TSHRP16473 764 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 ERCC2P18074 760 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 PSMA2P25787 234 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 IL1R2P27930 398 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 MIPP30301 263 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 MMP12P39900 470 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 TPI1P60174 286 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 TLE3Q04726 772 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 UGP2Q16851 508 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 PRRT3Q5FWE3 981 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 DCUN1D2Q6PH85 259 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 EFL1Q7Z2Z2 1120 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 SFTPA2Q8IWL1 248 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 FGF11Q92914 225 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 VCPIP1Q96JH7 1222 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 FUCA2Q9BTY2 467 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 DUSP23Q9BVJ7 150 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 SUV39H2Q9H5I1 410 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 DHX35Q9H5Z1 703 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 CATSPERBQ9H7T0 1116 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 ETNK2Q9NVF9 386 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 AIPL1Q9NZN9 384 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 UBA2Q9UBT2 640 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 APOBEC3BQ9UH17 382 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 IPO11Q9UI26 975 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 MYO6Q9UM54 1294 aa13.65□□□□□ -0.22
SOX2-OT-241ENST00000626948 CPED1A4D0V7 1026 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 TRAFD1O14545 582 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 TPP1O14773 563 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 USP12O75317 370 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 C1QL1O75973 258 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 PEX11BO96011 259 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ALPPL2P10696 532 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 SKILP12757 684 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 PRKCIP41743 596 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 NDST2P52849 883 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 YPEL5P62699 121 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 CCDC173Q0VFZ6 552 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 DPYSQ14117 519 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 IQCB1Q15051 598 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 TCEA2Q15560 299 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ISXQ2M1V0 245 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ALG11Q2TAA5 492 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ERMARDQ5T6L9 678 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 TXNRD3NBQ6F5E7 133 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 MACC1Q6ZN28 852 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 SPACA3Q8IXA5 215 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 CXorf40AQ8TE69 158 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 TSACCQ96A04 125 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ECHDC3Q96DC8 303 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ARHGEF26Q96DR7 871 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 BPIFA3Q9BQP9 254 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 CWC15Q9P013 229 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 ENTPD2Q9Y5L3 495 aa13.64□□□□□ -0.23
SOX2-OT-241ENST00000626948 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
SOX2-OT-241ENST00000626948 LMO7DNF2Z398 122 aa13.63□□□□□ -0.23
SOX2-OT-241ENST00000626948 H3BM21 787 aa13.63□□□□□ -0.23
SOX2-OT-241ENST00000626948 EEF2KO00418 725 aaKnown RBP13.63□□□□□ -0.23
SOX2-OT-241ENST00000626948 DXOO77932 396 aaKnown RBP13.63□□□□□ -0.23
SOX2-OT-241ENST00000626948 FTLP02792 175 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-241ENST00000626948 LIG3P49916 1009 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms