RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 PSMG2Q969U7 264 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TSPAN17Q96FV3 270 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 IGSF5Q9NSI5 407 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 NCKIPSDQ9NZQ3 722 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 THSD7BQ9C0I4 1608 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 A6NHS1 94 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 OR6C75A6NL08 312 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 DRGXA6NNA5 263 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC7A4O43246 635 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TBX18O95935 607 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 PPARGP37231 505 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MTTPP55157 894 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 IL10RBQ08334 325 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 NSUN2Q08J23 767 aaKnown RBP eCLIP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCNIQ14094 377 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CSHL1Q14406 222 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF789Q5FWF6 425 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 ACBD5Q5T8D3 534 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 AGAP9Q5VTM2 703 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 FAM171A1Q5VUB5 890 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF280DQ6N043 979 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MIB1Q86YT6 1006 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 KBTBD2Q8IY47 623 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TTC9BQ8N6N2 239 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TXNDC5Q8NBS9 432 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 OR13J1Q8NGT2 312 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC26A7Q8TE54 656 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCDC124Q96CT7 223 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCDC126Q96EE4 140 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SGF29Q96ES7 293 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 GLT1D1Q96MS3 346 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 NDNQ99608 321 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 OLFM1Q99784 485 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 UNKQ9C0B0 810 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 POMKQ9H5K3 350 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF385DQ9H6B1 395 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TLR8Q9NR97 1041 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MARCH2Q9P0N8 246 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 POMPQ9Y244 141 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CASP8AP2Q9UKL3 1982 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 DOCK4Q8N1I0 1966 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MIA3Q5JRA6 1907 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MROH6A6NGR9 719 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TRPC5OSA6NMA1 111 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 EIF4E1BA6NMX2 242 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 RAMP2O60895 175 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SORBS2O94875 1100 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 ALDH1A1P00352 501 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 LTA4HP09960 611 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TAF10Q12962 218 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CYLC2Q14093 348 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 POLD3Q15054 466 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC14A2Q15849 920 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 PDCD2Q16342 344 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 PARP15Q460N3 678 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TECRLQ5HYJ1 363 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 SIRPB2Q5JXA9 342 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 C10orf120Q5SQS8 335 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 NXNQ6DKJ4 435 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 KLC3Q6P597 504 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 C16orf89Q6UX73 402 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 HPS6Q86YV9 775 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 CILP2Q8IUL8 1156 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 KDM1BQ8NB78 822 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 ARRDC2Q8TBH0 407 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 PYDC1Q8WXC3 89 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TADA1Q96BN2 335 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 RPRD1AQ96P16 312 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 MFSD1Q9H3U5 465 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 TMEM161AQ9NX61 479 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 RNF186Q9NXI6 227 aa8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 UXTQ9UBK9 157 aaPredicted RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 PRPF19Q9UMS4 504 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 G3BP2Q9UN86 482 aaKnown RBP8.38□□□□□ -1.07
SND1-IT1-201ENST00000623342 LOC285095A0A1B0GVY8 99 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC12A8A0AV02 714 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 KIF3CO14782 793 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 AIM2O14862 343 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 SOAT2O75908 522 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 IGLV3-27P01718 113 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 JUNP05412 331 aaKnown RBP8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 HMBSP08397 361 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 RBP1P09455 135 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 COL6A1P12109 1028 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 NUDT2P50583 147 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 ARPP19P56211 112 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 PFKPQ01813 784 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 DSG1Q02413 1049 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 SERINC3Q13530 473 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 IHHQ14623 411 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 LBRQ14739 615 aaKnown RBP8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 HERC3Q15034 1050 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 TCHHL1Q5QJ38 904 aaPredicted RBP8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 SH2D4BQ5SQS7 431 aa8.37□□□□□ -1.07
SND1-IT1-201ENST00000623342 HECTD2Q5U5R9 776 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms