RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 AMIGO2Q86SJ2 522 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF781Q8N8C0 355 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PCDH19Q8TAB3 1148 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC35F5Q8WV83 523 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 LINC01599Q8WXQ3 324 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 RSPH1Q8WYR4 309 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 CERS2Q96G23 380 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SIGLEC10Q96LC7 697 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PRICKLE1Q96MT3 831 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 UROC1Q96N76 676 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PEBP4Q96S96 227 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC4A5Q9BY07 1137 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 C20orf27Q9GZN8 174 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MRGBPQ9NV56 204 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 GMEB1Q9Y692 573 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 DENRO43583 198 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 GCATO75600 419 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SORBS2O94875 1100 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SCGB1D2O95969 90 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 NPR3P17342 541 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 EPHA3P29320 983 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ACADSBP45954 432 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 RPL14P50914 215 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC6A3Q01959 620 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 GBE1Q04446 702 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 STX5Q13190 355 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 MPP3Q13368 585 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 GRM2Q14416 872 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PRPSAP1Q14558 356 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 MYBPC3Q14896 1274 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 C16orf72Q14CZ0 275 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SPANXN3Q5MJ09 141 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 C16orf87Q6PH81 154 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SH2D5Q6ZV89 423 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SCN4BQ8IWT1 228 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 DCLK2Q8N568 766 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ZSCAN18Q8TBC5 510 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM15Q9C019 465 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 WDR55Q9H6Y2 383 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 LMCD1Q9NZU5 365 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC17A6Q9P2U8 582 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ADAM28Q9UKQ2 775 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 DSEQ9UL01 958 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 CDH9Q9ULB4 789 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 TRPC5OSA6NMA1 111 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 RNF103O00237 685 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PIGNO95427 931 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PFKMP08237 780 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 USP17L7P0C7H9 530 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 IMPDH2P12268 514 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 BDNFP23560 247 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 TKTP29401 623 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 GRIA1P42261 906 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 THOP1P52888 689 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ADIGQ0VDE8 80 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 IKBKEQ14164 716 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM171A1Q5VUB5 890 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 LRRC8BQ6P9F7 803 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 TTC33Q6PID6 262 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PATL1Q86TB9 770 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF554Q86TJ5 538 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 KBTBD6Q86V97 674 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 UNC5BQ8IZJ1 945 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PGAM4Q8N0Y7 254 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 NDRG1Q92597 394 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PCED1BQ96HM7 432 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PIWIL1Q96J94 861 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 HNRNPABQ99729 332 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 DUSP16Q9BY84 665 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SEMA6AQ9H2E6 1030 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 RRN3Q9NYV6 651 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 RAP2CQ9Y3L5 183 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 AP4S1Q9Y587 144 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 HACD1B0YJ81 288 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PAPSS1O43252 624 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 DNAJA2O60884 412 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PBX3P40426 434 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 GLRBP48167 497 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM189BP81408 668 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 DAB2P98082 770 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 TAZQ16635 292 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC9B1Q4ZJI4 515 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 PGM2L1Q6PCE3 622 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ZBTB49Q6ZSB9 765 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SPATA2LQ8IUW3 424 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 GABPB2Q8TAK5 448 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 HSFY1Q96LI6 401 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 COLEC11Q9BWP8 271 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 CCDC68Q9H2F9 335 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 CRTAC1Q9NQ79 661 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 AASDHPPTQ9NRN7 309 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 COLQQ9Y215 455 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-213ENST00000618999 SEC24DO94855 1032 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 ALDOAP04075 364 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-213ENST00000618999 OR4Q2P0C623 313 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms