RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 STAT4Q14765 748 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 GRM3Q14832 879 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 SPA17Q15506 151 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 ANKRD20A8PQ5CZ79 823 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 MAP7D3Q8IWC1 876 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 CCDC170Q8IYT3 715 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 TMEM145Q8NBT3 493 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 PCDH19Q8TAB3 1148 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 SETD7Q8WTS6 366 aaKnown RBP16.16■□□□□ 0.18
BRCA1-228ENST00000618469 ZNF599Q96NL3 588 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 CPEB1Q9BZB8 566 aaKnown RBP16.16■□□□□ 0.18
BRCA1-228ENST00000618469 GDF3Q9NR23 364 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 TFR2Q9UP52 801 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 TRPM6Q9BX84 2022 aa16.16■□□□□ 0.18
BRCA1-228ENST00000618469 TLR4O00206 839 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 TSPAN6O43657 245 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 SPOPO43791 374 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 MAFKO60675 156 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 MAP3K6O95382 1288 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 LCA5LO95447 670 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 KRT1P04264 644 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 TNNT1P13805 278 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 SERPINA4P29622 427 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 NOP2P46087 812 aaKnown RBP16.15■□□□□ 0.18
BRCA1-228ENST00000618469 NXPH1P58417 271 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 SRLQ86TD4 932 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 TTC7BQ86TV6 843 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 PAF1Q8N7H5 531 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 MFSD2AQ8NA29 543 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 NSMCE1Q8WV22 266 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 RAPGEF5Q92565 580 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 FAF2Q96CS3 445 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 FEM1CQ96JP0 617 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 PSKH2Q96QS6 385 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 TUBGCP5Q96RT8 1024 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 ATP13A3Q9H7F0 1226 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 LUC7LQ9NQ29 371 aaKnown RBP16.15■□□□□ 0.18
BRCA1-228ENST00000618469 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
BRCA1-228ENST00000618469 TSPAN11A1L157 253 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 AREL1O15033 823 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
BRCA1-228ENST00000618469 PEX11BO96011 259 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 FECHP22830 423 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 CSNK1DP48730 415 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 SCNN1BP51168 640 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 RENBPP51606 427 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 CLDN2P57739 230 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 AP1S1P61966 158 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 GALNT2Q10471 571 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 FGL2Q14314 439 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 PAFAH1B3Q15102 231 aaKnown RBP16.14■□□□□ 0.17
BRCA1-228ENST00000618469 TCEAL1Q15170 157 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 CCDC157Q569K6 752 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 PRAMEF14Q5SWL7 426 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 GCNT7Q6ZNI0 430 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 PTAR1Q7Z6K3 402 aaPredicted RBP16.14■□□□□ 0.17
BRCA1-228ENST00000618469 IQCHQ86VS3 1027 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 ZSCAN30Q86W11 494 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 CAMK1DQ8IU85 385 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 BBS5Q8N3I7 341 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 CXorf40AQ8TE69 158 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 ELF4Q99607 663 aaPredicted RBP16.14■□□□□ 0.17
BRCA1-228ENST00000618469 SLC17A9Q9BYT1 436 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 SUV39H2Q9H5I1 410 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 PCDHGB2Q9Y5G2 931 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 PCDHA13Q9Y5I0 950 aa16.14■□□□□ 0.17
BRCA1-228ENST00000618469 A0A1B0GTQ1 180 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 FAM149AA5PLN7 773 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 IGLON5A6NGN9 336 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 FLRT2O43155 660 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 BUB1BO60566 1050 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 MAGEC1O60732 1142 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 NDUFA10O95299 355 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 THEGLP0DJG4 465 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 TIMP2P16035 220 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 ITIH2P19823 946 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 COMTP21964 271 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 KDELR1P24390 212 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 GARSP41250 739 aaKnown RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 SLC1A1P43005 524 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 MMP13P45452 471 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 GBE1Q04446 702 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 BCL2L1Q07817 233 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 CYP4F3Q08477 520 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 ELP6Q0PNE2 266 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 OVGP1Q12889 678 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 ODF2Q5BJF6 829 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 BRAT1Q6PJG6 821 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 ZSWIM9Q86XI8 627 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 SPATS2Q86XZ4 545 aaKnown RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 TMTC1Q8IUR5 882 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 RHOT1Q8IXI2 618 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 PGBD5Q8N414 524 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 PQLC3Q8N755 202 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 KLHDC7BQ96G42 594 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 ZNF641Q96N77 438 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 MGME1Q9BQP7 344 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms