RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SNAP47Q5SQN1 464 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 DCUN1D2Q6PH85 259 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 KDELC1Q6UW63 502 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 DCP1BQ8IZD4 617 aaKnown RBP12.2□□□□□ -0.46
SRRT-216ENST00000618262 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 ZNF461Q8TAF7 563 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 SLC35F5Q8WV83 523 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 C18orf8Q96DM3 657 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
SRRT-216ENST00000618262 MAGEB5Q9BZ81 275 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 TLE6Q9H808 572 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 TMPRSS4Q9NRS4 437 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 STOML1Q9UBI4 398 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 KRT6AP02538 564 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 KRT6BP04259 564 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 HMBSP08397 361 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 LTA4HP09960 611 aaKnown RBP12.2□□□□□ -0.46
SRRT-216ENST00000618262 TCF4P15884 667 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
SRRT-216ENST00000618262 BCAT1P54687 386 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 OR6P1Q8NGX9 317 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 DGCR14Q96DF8 476 aaKnown RBP12.2□□□□□ -0.46
SRRT-216ENST00000618262 KLHL5Q96PQ7 755 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 PKMYT1Q99640 499 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 ZPBPQ9BS86 351 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 NGRNQ9NPE2 291 aaKnown RBP12.2□□□□□ -0.46
SRRT-216ENST00000618262 GPRC5BQ9NZH0 403 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 ANAPC7Q9UJX3 599 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 HCFC2Q9Y5Z7 792 aa12.2□□□□□ -0.46
SRRT-216ENST00000618262 SMIM23A6NLE4 172 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 SIGLEC16A6NMB1 481 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CENPBD1B2RD01 187 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 H7C4K7 107 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 LPXNO60711 386 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 DNAJC6O75061 913 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 IFNA14P01570 189 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CXCR5P32302 372 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 AMPD2Q01433 879 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 GPR17Q13304 367 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 DHX34Q14147 1143 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 CBX2Q14781 532 aaPredicted RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 ARHGAP11AQ6P4F7 1023 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CYP2S1Q96SQ9 504 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 SMG9Q9H0W8 520 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 EPB41L1Q9H4G0 881 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 ASIC3Q9UHC3 531 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 H3BNC9 293 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 KPNA5O15131 536 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 UBOX5O94941 541 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 KLHL2O95198 593 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 C8AP07357 584 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 MMP8P22894 467 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 VAMP1P23763 118 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 NKX2-5P52952 324 aaPredicted RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 COPS2P61201 443 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 ERVK-21P61565 698 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 NME3Q13232 169 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 STXBP5Q5T5C0 1151 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 C4orf50Q6ZRC1 276 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 MIB1Q86YT6 1006 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 TICAM1Q8IUC6 712 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 MMAAQ8IVH4 418 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 ANGPTL6Q8NI99 470 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 DDI1Q8WTU0 396 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 PYROXD1Q8WU10 500 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 ING5Q8WYH8 240 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 SLC9A6Q92581 669 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CAVIN3Q969G5 261 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CHMP6Q96FZ7 201 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CEP19Q96LK0 163 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 DDX50Q9BQ39 737 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 RNF38Q9H0F5 515 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 CAAP1Q9H8G2 361 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 MAN1C1Q9NR34 630 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 PAQR5Q9NXK6 330 aaPredicted RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 PTBP2Q9UKA9 531 aaKnown RBP12.19□□□□□ -0.46
SRRT-216ENST00000618262 NAALADL1Q9UQQ1 740 aa12.19□□□□□ -0.46
SRRT-216ENST00000618262 TIPRLO75663 272 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 BAG2O95816 211 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 HSMCR30P0CW71 290 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 ATF2P15336 505 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 CTHP32929 405 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 RGS19P49795 217 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 ETV1P50549 477 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 PRAMEP78395 509 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■□□ 18.1
SRRT-216ENST00000618262 DNAJC3Q13217 504 aa12.18□□□□□ -0.46
SRRT-216ENST00000618262 SGCGQ13326 291 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms