RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ANKRD20A4Q4UJ75 823 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 TNFAIP8L3Q5GJ75 292 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 LMNTD2Q8IXW0 634 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SRRM1Q8IYB3 904 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 MPP5Q8N3R9 675 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 DYDC1Q8WWB3 177 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 ING5Q8WYH8 240 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SMARCD2Q92925 531 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 PEX13Q92968 403 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 GORASP1Q9BQQ3 440 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 IQCGQ9H095 443 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SMG9Q9H0W8 520 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 TRABDQ9H4I3 376 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SSU72Q9NP77 194 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 ABCB8Q9NUT2 735 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 DUS2Q9NX74 493 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 MARK1Q9P0L2 795 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 VPS51Q9UID3 782 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 NYNRINQ9P2P1 1898 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 DENND4CQ5VZ89 1909 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 MYO15AQ9UKN7 3530 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 NEDD8-MDP1E9PL57 170 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 SCAMP3O14828 347 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 PENKP01210 267 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 NFKBIAP25963 317 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 MZF1P28698 734 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 HADHAP40939 763 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 CSNK1DP48730 415 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 ATP1A2P50993 1020 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 ZXDBP98169 803 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 HTR4Q13639 388 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 PDGFRLQ15198 375 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 E2F5Q15329 346 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 ANGPT1Q15389 498 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 SLC1A5Q15758 541 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 PLEKHG6Q3KR16 790 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 CERCAMQ5T4B2 595 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 GRTP1Q5TC63 336 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 LEKR1Q6ZMV7 388 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 PRPF39Q86UA1 669 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 YAF2Q8IY57 180 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 AHI1Q8N157 1196 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 SLC25A41Q8N5S1 370 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 ARRDC2Q8TBH0 407 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 BPIFB1Q8TDL5 484 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 WFIKKN2Q8TEU8 576 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 ATP2A3Q93084 1043 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 BHMTQ93088 406 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 RMDN1Q96DB5 314 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 CPNE1Q99829 537 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 FAM167BQ9BTA0 163 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 DHRS4Q9BTZ2 278 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 C20orf96Q9NUD7 363 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 INTS9Q9NV88 658 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 HACD3Q9P035 362 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 CA14Q9ULX7 337 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 TCAF1Q9Y4C2 921 aa16.93■□□□□ 0.3
TRAPPC3-210ENST00000617904 HELZP42694 1942 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 PTPRZ1P23471 2315 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 LOC285095A0A1B0GVY8 99 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 A0A1W2PQ67 120 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 PFDN6O15212 129 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 PAPSS2O95340 614 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 ASLP04424 464 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 TPH1P17752 444 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 POLR2EP19388 210 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 SPRP35270 261 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 GP5P40197 560 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 MDH1P40925 334 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 RECQLP46063 649 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 SLC18A1P54219 525 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 EPHB1P54762 984 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 SNRPD1P62314 119 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 CRADDP78560 199 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 ARF5P84085 180 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 NIPAL4Q0D2K0 466 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 LMAN2Q12907 356 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 POU6F1Q14863 301 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 RNF43Q68DV7 783 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 TRABD2AQ86V40 505 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 EXOC3L1Q86VI1 746 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 ST13P5Q8NFI4 369 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 DCAKDQ8WVC6 231 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 OSCP1Q8WVF1 389 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 TADA1Q96BN2 335 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 CENPTQ96BT3 561 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 SGSM3Q96HU1 749 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 WDR83Q9BRX9 315 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 CEP44Q9C0F1 390 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 PIH1D1Q9NWS0 290 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 CCL26Q9Y258 94 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 OR51B4Q9Y5P0 310 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 NUMBLQ9Y6R0 609 aa16.92■□□□□ 0.3
TRAPPC3-210ENST00000617904 NUP205Q92621 2012 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 C2orf81A6NN90 581 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 SRRM3A6NNA2 597 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 TIMM44O43615 452 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 ZMPSTE24O75844 475 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 PABPC1P11940 636 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms