RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 PRRC2BQ5JSZ5 2229 aaKnown RBP20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 K7ERQ8 282 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TM9SF1O15321 606 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 DHRS4L1P0CG22 281 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SKIV2L2P42285 1042 aaKnown RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CCDC15Q0P6D6 951 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 RFTN1Q14699 578 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ZKSCAN8Q15776 578 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PDPK2PQ6A1A2 396 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 DENND6AQ8IWF6 608 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 NDUFAF2Q8N183 169 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 OR13J1Q8NGT2 312 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PTCD2Q8WV60 388 aaKnown RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 N4BP2L2Q92802 583 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 KLHL14Q9P2G3 628 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 XIRP2A4UGR9 3374 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 WDR91A4D1P6 747 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CCL22O00626 93 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 COPEO14579 308 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PRLP01236 227 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SERPINF2P08697 491 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PIRTP0C851 137 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 AVPR1AP37288 418 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PDE1CQ14123 709 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PPM1JQ5JR12 505 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GRTP1Q5TC63 336 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 HHATQ5VTY9 493 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 FSTL4Q6MZW2 842 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 KLHL29Q96CT2 875 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TASP1Q9H6P5 420 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 EBF2Q9HAK2 575 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LHX3Q9UBR4 397 aa20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MTO1Q9Y2Z2 717 aaKnown RBP20.79■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CCDC195A0A1B0GUA6 201 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TYW5A2RUC4 315 aaKnown RBP20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MROH6A6NGR9 719 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 INSIG1O15503 277 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 BMP1P13497 986 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PFKLP17858 780 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CD70P32970 193 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PGGT1BP53609 377 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LIMK2P53671 638 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LMAN2Q12907 356 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CBX2Q14781 532 aaPredicted RBP20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PDK4Q16654 411 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 FYB2Q5VWT5 728 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CGB2Q6NT52 195 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 RTL10Q7L3V2 364 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CMC1Q7Z7K0 106 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 DCLK2Q8N568 766 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 C12orf76Q8N812 135 aaPredicted RBP20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ING5Q8WYH8 240 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PTPRN2Q92932 1015 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 RANBP9Q96S59 729 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 INTS6Q9UL03 887 aaKnown RBP20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CHKBQ9Y259 395 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ZNF510Q9Y2H8 683 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 FCF1Q9Y324 198 aaKnown RBP20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PLLPQ9Y342 182 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LDB2O43679 373 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PDHA1P08559 390 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 HNRNPA1P09651 372 aaKnown RBP eCLIP20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ARSDP51689 593 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MPP1Q00013 466 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 DNAJC3Q13217 504 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CTBP1Q13363 440 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PTPRCAPQ14761 206 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TSTD2Q5T7W7 516 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TLDC1Q6P9B6 456 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 BBS5Q8N3I7 341 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 IFT43Q96FT9 208 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PRKD2Q9BZL6 878 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CAB39LQ9H9S4 337 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SLCO1B3Q9NPD5 702 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ARHGEF3Q9NR81 526 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TDP1Q9NUW8 608 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MKS1Q9NXB0 559 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TXNDC16Q9P2K2 825 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PCDHGC4Q9Y5F7 938 aa20.78■□□□□ 0.92
CNTNAP3B-212ENST00000617422 E2F8A0AVK6 867 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 HEATR9A2RTY3 570 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 EPOP01588 193 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 AHSGP02765 367 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CEBPBP17676 345 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 KCNJ2P63252 427 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MPPE1Q53F39 396 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 KIAA0930Q6ICG6 404 aaPredicted RBP20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TMEM25Q86YD3 366 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CNTN4Q8IWV2 1026 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LMLNQ96KR4 655 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LINC00597Q9H2U6 94 aa20.77■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SMAD6O43541 496 aaKnown RBP20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 BUD23O43709 281 aaKnown RBP20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 DLG2Q15700 870 aa20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 MPP7Q5T2T1 576 aa20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 DCAF4L2Q8NA75 395 aa20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 SCUBE2Q9NQ36 999 aa20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 SPO11Q9Y5K1 396 aa20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 ARL5AQ9Y689 179 aa20.76■□□□□ 0.91
CNTNAP3B-212ENST00000617422 AURKAO14965 403 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms