RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CNTN2Q02246 1040 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MLC1Q15049 377 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MEIOBQ8N635 442 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 WDR36Q8NI36 951 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 KLHDC4Q8TBB5 520 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MDM1Q8TC05 714 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 IPCEF1Q8WWN9 437 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 SNX21Q969T3 373 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ZNF333Q96JL9 665 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SPATA5L1Q9BVQ7 753 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PLEKHA1Q9HB21 404 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LRRD1A4D1F6 860 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC35F4A4IF30 521 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TMEM114B3SHH9 223 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 H3BNC9 293 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 H7C0S8 307 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MAGEB3O15480 346 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KLF8O95600 359 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC9A1P19634 815 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 AVPR2P30518 371 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 HTR7P34969 479 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CYP4F2P78329 520 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CYP4F3Q08477 520 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RASGEF1BQ0VAM2 473 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LY6KQ17RY6 165 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC2A7Q6PXP3 512 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TTLL10Q6ZVT0 673 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 NUP54Q7Z3B4 507 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SPATA21Q7Z572 469 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 HID1Q8IV36 788 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MRPL41Q8IXM3 137 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 ZBTB8BQ8NAP8 495 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 ZBED3Q96IU2 234 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 C11orf70Q9BRQ4 267 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 BCL2L14Q9BZR8 327 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 COQ6Q9Y2Z9 468 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 NOP16Q9Y3C1 178 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 KLHL33A6NCF5 533 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC27A2O14975 620 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PNLIPRP1P54315 467 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TRIM32Q13049 653 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KLHL38Q2WGJ6 581 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 IQCCQ4KMZ1 466 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LIPNQ5VXI9 398 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CYB5R4Q7L1T6 521 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RASGRP2Q7LDG7 609 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TMEM151BQ8IW70 566 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 C8orf58Q8NAV2 365 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CXorf38Q8TB03 319 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PTCD2Q8WV60 388 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 HSPBAP1Q96EW2 488 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 GORASP1Q9BQQ3 440 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SP140LQ9H930 580 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 DYNLRB1Q9NP97 96 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 BFARQ9NZS9 450 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 COPG1Q9Y678 874 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 FARS2O95363 451 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TRUB2O95900 331 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TM4SF1P30408 202 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RFX3P48380 749 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 DDR1Q08345 913 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 DMTNQ08495 405 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CEP85LQ5SZL2 805 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PIM3Q86V86 326 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SH2D3CQ8N5H7 860 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 FAM71BQ8TC56 605 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 FAM111AQ96PZ2 611 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 C7orf25Q9BPX7 421 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ADAM19Q9H013 955 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ALDH8A1Q9H2A2 487 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 GANQ9H2C0 597 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KCNK9Q9NPC2 374 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TRIM33Q9UPN9 1127 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SOAT2O75908 522 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ECDO95905 644 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 CYP3A5P20815 502 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CHI3L1P36222 383 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 GPR15P49685 360 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 NCOA4Q13772 614 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TAF5Q15542 800 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TOP6BLQ8N6T0 577 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 THOC3Q96J01 351 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 C12orf42Q96LP6 360 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CD274Q9NZQ7 290 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PCDHGA5Q9Y5G8 931 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 NTSR1P30989 418 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 STX17P56962 302 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KCNC4Q03721 635 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KRR1Q13601 381 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 MLIPQ5VWP3 458 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LANCL3Q6ZV70 420 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 GPR155Q7Z3F1 870 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TMC8Q8IU68 726 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 OR5M3Q8NGP4 307 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RPLP0P6Q8NHW5 317 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ELMO1Q92556 727 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 OSBPL10Q9BXB5 764 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ANKHQ9HCJ1 492 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TLR7Q9NYK1 1049 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 PHF24Q9UPV7 400 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms