RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 BACE2Q9Y5Z0 518 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 BTAF1O14981 1849 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 CAPN14A8MX76 684 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 PSMB4P28070 264 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 MC4RP32245 332 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 KCNJ1P48048 391 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 NFYCQ13952 458 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 BRAT1Q6PJG6 821 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 C17orf64Q86WR6 236 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 SYT12Q8IV01 421 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 MPP5Q8N3R9 675 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF398Q8TD17 642 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 CLP1Q92989 425 aaKnown RBP9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 AZIN2Q96A70 460 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 NUDT5Q9UKK9 219 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 SUFUQ9UMX1 484 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 ALPIP09923 528 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 PPIBP23284 216 aaKnown RBP9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 ALDH6A1Q02252 535 aaKnown RBP9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF614Q8N883 585 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 ACTRT2Q8TDY3 377 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 KAT2BQ92831 832 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 PACSIN1Q9BY11 444 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 IRX2Q9BZI1 471 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 TM6SF2Q9BZW4 377 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 BTBD1Q9H0C5 482 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 OSGEPQ9NPF4 335 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 KLQ9UEF7 1012 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 PCDHGA4Q9Y5G9 962 aa9.8□□□□□ -0.84
TNFRSF9-204ENST00000615230 CD3EAPO15446 510 aaKnown RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 PDE9AO76083 593 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 HIST1H2ABP04908 130 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ERCC2P18074 760 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TPSB2P20231 275 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CASP5P51878 434 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 COPAP53621 1224 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 DAOAP59103 153 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 C1QTNF8P60827 252 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TPSAB1Q15661 275 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CCDC85BQ15834 202 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 HIST3H2AQ7L7L0 130 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 B4GALNT2Q8NHY0 566 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ATG4AQ8WYN0 398 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 HIST1H2ACQ93077 130 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 NTAN1Q96AB6 310 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 NUS1Q96E22 293 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAM120BQ96EK7 910 aaKnown RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC2A11Q9BYW1 496 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 EPN3Q9H201 632 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 RXFP1Q9HBX9 757 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 GGA2Q9UJY4 613 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 RAI2Q9Y5P3 530 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TMEM120BA0PK00 339 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TK2O00142 265 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CLDN4O14493 209 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 INSIG1O15503 277 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 VEGFDO43915 354 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SEC22BO75396 215 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ENO1P06733 434 aaKnown RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF865P0CJ78 1059 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 C15orf59Q2T9L4 293 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 DGKKQ5KSL6 1271 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC36A4Q6YBV0 504 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CACUL1Q86Y37 369 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TTLQ8NG68 377 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 WDR48Q8TAF3 677 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 HCAR2Q8TDS4 363 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 LRRC46Q96FV0 321 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAM83DQ9H4H8 585 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 NPHS2Q9NP85 383 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SEMA3GQ9NS98 782 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 L1RE1Q9UN81 338 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ASF1AQ9Y294 204 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 KLHL20Q9Y2M5 609 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ILVBLA1L0T0 632 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 C9J4A7 227 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TGFB1I1O43294 461 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CFIP05156 583 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF30P17039 623 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 BMPR1AP36894 532 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 RAD23BP54727 409 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ECT2LQ008S8 904 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 MMRN1Q13201 1228 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 MKRN4PQ13434 485 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TUBGCP5Q96RT8 1024 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TDP1Q9NUW8 608 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 A0A087X0B3 334 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 UBDO15205 165 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 LIASO43766 372 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TRIM13O60858 407 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC11A1P49279 550 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CYP4F8P98187 520 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 FBXO43Q4G163 708 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 CLEC4FQ8N1N0 589 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZBTB2Q8N680 514 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC4A11Q8NBS3 891 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF461Q8TAF7 563 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 OSBPL6Q9BZF3 934 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 TXNRD2Q9NNW7 524 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms