RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SARNPP82979 210 aaKnown RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 MPP3Q13368 585 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 SLMAPQ14BN4 828 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 EIF4HQ15056 248 aaKnown RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 CYTH1Q15438 398 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 HIF1AQ16665 826 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 GEN1Q17RS7 908 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 FAM153CQ494X1 144 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 PREPLQ4J6C6 727 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 SPDYCQ5MJ68 293 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 MBLAC2Q68D91 279 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 LEKR1Q6ZMV7 388 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 ZNF534Q76KX8 674 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 PHTF2Q8N3S3 785 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 TAB3Q8N5C8 712 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 ARRDC2Q8TBH0 407 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 ISG20Q96AZ6 181 aaKnown RBP11.57□□□□□ -0.56
SLIRP-212ENST00000613856 SERPINB12Q96P63 405 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 GTSE1Q9NYZ3 720 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 DEC1Q9P2X7 70 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 LHX3Q9UBR4 397 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 FAM153AQ9UHL3 310 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 SLC25A13Q9UJS0 675 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 WASF3Q9UPY6 502 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 TTLL3Q9Y4R7 772 aa11.57□□□□□ -0.56
SLIRP-212ENST00000613856 MYLKQ15746 1914 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 DMXL2Q8TDJ6 3036 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 AP3B1O00203 1094 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
SLIRP-212ENST00000613856 MMP2P08253 660 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 ZNF806P0C7X5 589 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 SRCP12931 536 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 POLR2EP19388 210 aaKnown RBP11.56□□□□□ -0.56
SLIRP-212ENST00000613856 CTHP32929 405 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 OPRD1P41143 372 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 CSNK1DP48730 415 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 LMAN1P49257 510 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 MAXP61244 160 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 SKOR1P84550 965 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 ECT2LQ008S8 904 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 DSC2Q02487 901 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 NIPAL4Q0D2K0 466 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 PON2Q15165 354 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 FAM182AQ5T1J6 154 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 TMEM215Q68D42 235 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 NAPEPLDQ6IQ20 393 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 LRRC8BQ6P9F7 803 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 KDELC1Q6UW63 502 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 LINGO4Q6UY18 593 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 CENPUQ71F23 418 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 PRPF39Q86UA1 669 aaKnown RBP11.56□□□□□ -0.56
SLIRP-212ENST00000613856 PDIK1LQ8N165 341 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 SH2D3CQ8N5H7 860 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 NAT16Q8N8M0 369 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 TERB1Q8NA31 727 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 KDM1BQ8NB78 822 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 TSEN2Q8NCE0 465 aaKnown RBP11.56□□□□□ -0.56
SLIRP-212ENST00000613856 CHFRQ96EP1 664 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 RBM15Q96T37 977 aaKnown RBP eCLIP11.56□□□□□ -0.56
SLIRP-212ENST00000613856 SEMA3CQ99985 751 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 IER2Q9BTL4 223 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 ACTL7AQ9Y615 435 aa11.56□□□□□ -0.56
SLIRP-212ENST00000613856 NBEAQ8NFP9 2946 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 F5H423 210 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 GOLGA8MH3BSY2 632 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 TRIM24O15164 1050 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 INSIG1O15503 277 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 TIMM44O43615 452 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 ATP9BO43861 1147 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 EPN2O95208 641 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 PAPSS2O95340 614 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 MT-CYBP00156 380 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 GSRP00390 522 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 MT-CO1P00395 513 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 ATP5BP06576 529 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 SERPINF2P08697 491 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 DLDP09622 509 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 ADRA1AP35348 466 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 CD86P42081 329 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 CTSOP43234 321 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 MAPK8P45983 427 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 RGRP47804 291 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 NUMBP49757 651 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 RHOAP61586 193 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 AP1S1P61966 158 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 DHX9Q08211 1270 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 FOXC1Q12948 553 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 CCINQ13939 588 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 DNAJC21Q5F1R6 531 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 PLA2G2CQ5R387 149 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 ARMC3Q5W041 872 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 C22orf39Q6P5X5 142 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 CAND1Q86VP6 1230 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 WDR5BQ86VZ2 330 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms