RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TRAV19A0A0A6YYK7 116 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 MSCO60682 206 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 KRT36O76013 467 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 UGT2B15P54855 530 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 PYDC2Q56P42 97 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 ZNF554Q86TJ5 538 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 LRRC52Q8N7C0 313 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 HJURPQ8NCD3 748 aaPredicted RBP17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 CSGALNACT1Q8TDX6 532 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 ELMO1Q92556 727 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 TBCDQ9BTW9 1192 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 ASB8Q9H765 288 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 MAGEL2Q9UJ55 1249 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 SHBGP04278 402 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 FOLH1Q04609 750 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 TAF13Q15543 124 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.52■□□□□ 0.44e-9■■■■■ 83.5
HMGXB3-206ENST00000613459 LRRC17Q8N6Y2 441 aa17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 TEFMQ96QE5 360 aaKnown RBP17.52■□□□□ 0.4
HMGXB3-206ENST00000613459 C1QTNF3-AMACRE9PGA6 284 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 NFKB1P19838 968 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 SRP54P61011 504 aaKnown RBP17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 PSMD5Q16401 504 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 C9orf131Q5VYM1 1079 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 C16orf46Q6P387 395 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 OLFML1Q6UWY5 402 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 ZHX1-C8orf76Q96EF9 292 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 HOPXQ9BPY8 73 aaPredicted RBP17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 RCOR3Q9P2K3 495 aaPredicted RBP17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 ZNF510Q9Y2H8 683 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 CSH1P0DML2 217 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 CSH2P0DML3 217 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 TFEBP19484 476 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 CD86P42081 329 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 ACLYP53396 1101 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 TRIM40Q6P9F5 258 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 ZNF540Q8NDQ6 660 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 BAP1Q92560 729 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 BORCS5Q969J3 196 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 FTHL17Q9BXU8 183 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 ACE2Q9BYF1 805 aaPredicted RBP17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 PTPRHQ9HD43 1115 aa17.52■□□□□ 0.39
HMGXB3-206ENST00000613459 DISP2A7MBM2 1401 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 CCDC162PA2VCL2 907 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 SSNA1O43805 119 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 COL6A2P12110 1019 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 GLRA2P23416 452 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 PLK1P53350 603 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 RAB25P57735 213 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 BST1Q10588 318 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 GRM3Q14832 879 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 KLHL24Q6TFL4 600 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 TRAPPC5Q8IUR0 188 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 TMEM161BQ8NDZ6 487 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 DHX33Q9H6R0 707 aaKnown RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 MRPL17Q9NRX2 175 aaKnown RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ATXN10Q9UBB4 475 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ITGA2BP08514 1039 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 PRKAR1AP10644 381 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 OGNP20774 298 aaKnown RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ARMC8Q8IUR7 673 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 PHC3Q8NDX5 983 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ADAM32Q8TC27 787 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 RTKNQ9BST9 563 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 KPNA3O00505 521 aaPredicted RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 SERPINB7O75635 380 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 UBA1P22314 1058 aaKnown RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 LGALS3BPQ08380 585 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 LIN54Q6MZP7 749 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 FAM92BQ6ZTR7 304 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 SPATA19Q7Z5L4 167 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 TCAIMQ8N3R3 496 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 PRELID2Q8N945 189 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 RNASE11Q8TAA1 199 aaKnown RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ZBTB45Q96K62 511 aaPredicted RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 VPS35Q96QK1 796 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ABCB10Q9NRK6 738 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 TUBA8Q9NY65 449 aaPredicted RBP17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 MKL2Q9ULH7 1088 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 A0A0U1RQJ8 604 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 ASGR1P07306 291 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 HTR7P34969 479 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 KCNJ2P63252 427 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 NOMO3P69849 1222 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 FCHO2Q0JRZ9 810 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 SLC25A24Q6NUK1 477 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 TOP6BLQ8N6T0 577 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
HMGXB3-206ENST00000613459 GSAPA4D1B5 854 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 KLRC4O43908 158 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 NUDT14O95848 222 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 USP46P62068 366 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 FMO1Q01740 532 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 SMARCB1Q12824 385 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 PSMA8Q8TAA3 256 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 KAT5Q92993 513 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 FAM50BQ9Y247 325 aa17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 TMA7Q9Y2S6 64 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-206ENST00000613459 CDH3P22223 829 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms