RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNOT3-208ENST00000613073 LRGUKQ96M69 825 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 DCUN1D5Q9BTE7 237 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 FTHL17Q9BXU8 183 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CATSPERBQ9H7T0 1116 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 WDR37Q9Y2I8 494 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 KLF11O14901 512 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 MAFKO60675 156 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 SIN3BO75182 1162 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 HMBSP08397 361 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CD1EP15812 388 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CRHR1P34998 444 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 PDE1CQ14123 709 aaPredicted RBP16.63■□□□□ 0.25
CNOT3-208ENST00000613073 TCTN1Q2MV58 587 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 SPANXN3Q5MJ09 141 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 ARTNQ5T4W7 220 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 PIK3R6Q5UE93 754 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 RSPO2Q6UXX9 243 aaPredicted RBP16.63■□□□□ 0.25
CNOT3-208ENST00000613073 ZBTB46Q86UZ6 589 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CPNE9Q8IYJ1 553 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 TRIML2Q8N7C3 387 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 JADE3Q92613 823 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 SERPINB11Q96P15 392 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 VAT1Q99536 393 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 SEPT5Q99719 369 aaPredicted RBP16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CORO1BQ9BR76 489 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CRISPLD1Q9H336 500 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 PATJQ8NI35 1801 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 KCNU1A8MYU2 1149 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 DENRO43583 198 aaKnown RBP16.62■□□□□ 0.25
CNOT3-208ENST00000613073 FAM58BPP0C7Q3 252 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF24P17028 368 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 PRPSAP1Q14558 356 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 MGAT5BQ3V5L5 792 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 MANEALQ5VSG8 457 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 PGM2L1Q6PCE3 622 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 CMC1Q7Z7K0 106 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 TMEM173Q86WV6 379 aaPredicted RBP16.62■□□□□ 0.25
CNOT3-208ENST00000613073 PHTF2Q8N3S3 785 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 IPMKQ8NFU5 416 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 ARMC7Q9H6L4 198 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 RSL24D1Q9UHA3 163 aaKnown RBP16.62■□□□□ 0.25
CNOT3-208ENST00000613073 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
CNOT3-208ENST00000613073 ZCWPW2A0A1B0GU75 182 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 ALDH2P05091 517 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 CNTFP26441 200 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 RXRGP48443 463 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 SLC11A1P49279 550 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 RPL10AP62906 217 aaKnown RBP16.62■□□□□ 0.25
CNOT3-208ENST00000613073 GSTM4Q03013 218 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 PSMD5Q16401 504 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 LPCAT2Q7L5N7 544 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 STRA8Q7Z7C7 330 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 TMEM135Q86UB9 458 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 SCLYQ96I15 445 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 FUBP3Q96I24 572 aaKnown RBP eCLIP16.62■□□□□ 0.25
CNOT3-208ENST00000613073 CASD1Q96PB1 797 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 CCT7Q99832 543 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
CNOT3-208ENST00000613073 E9PBE3 544 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 CASQ2O14958 399 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 CCNCP24863 283 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 NMBRP28336 390 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 TBX4P57082 545 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 DNAJC14Q6Y2X3 702 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 TIFABQ6ZNK6 161 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 KBTBD6Q86V97 674 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 BBS5Q8N3I7 341 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 CCDC97Q96F63 343 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 C20orf96Q9NUD7 363 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 SELENONQ9NZV5 590 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 COL4A4P53420 1690 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 ERI2A8K979 691 aaKnown RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 SYN3O14994 580 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 FGF10O15520 208 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 PQBP1O60828 265 aaKnown RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 PORP16435 677 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 KCNA4P22459 653 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 TYK2P29597 1187 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 GP5P40197 560 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 MLLT6P55198 1093 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 PHEXP78562 749 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 TBCCQ15814 346 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 NRF1Q16656 503 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 N4BP2L1Q5TBK1 243 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 RNF19BQ6ZMZ0 732 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 TAS1R1Q7RTX1 841 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 WDR75Q8IWA0 830 aaKnown RBP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 ACTRT2Q8TDY3 377 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 APBB2Q92870 758 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 C8orf48Q96LL4 319 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 MAN1C1Q9NR34 630 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF358Q9NW07 568 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms