RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TSC1Q92574 1164 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 CAMK1GQ96NX5 476 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 PANX2Q96RD6 677 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 NUDCD1Q96RS6 583 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 KCTD5Q9NXV2 234 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 AMACRQ9UHK6 382 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ATP8A1Q9Y2Q0 1164 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 C10orf142B7Z368 130 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 INSIG1O15503 277 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 MAFKO60675 156 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 LDOC1O95751 146 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 KRT1P04264 644 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 FTH1P19P0C7X4 201 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 TNNT1P13805 278 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 KDELR1P24390 212 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 CCNCP24863 283 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 HTR1BP28222 390 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 GARSP41250 739 aaKnown RBP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 YPEL5P62699 121 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 SHC2P98077 582 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 SLC10A7Q0GE19 358 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 PAFAH1B3Q15102 231 aaKnown RBP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 TMEM52BQ4KMG9 183 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 DBX2Q6ZNG2 339 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 ARHGAP36Q6ZRI8 547 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 ABI3BPQ7Z7G0 1075 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 PARGQ86W56 976 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 VSIG1Q86XK7 387 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 CAMK1DQ8IU85 385 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 TC2NQ8N9U0 490 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 FAM71BQ8TC56 605 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 BTN2A2Q8WVV5 523 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 C1QTNF2Q9BXJ5 285 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 POLR1EQ9GZS1 481 aaKnown RBP12.44□□□□□ -0.42
CBWD3-208ENST00000612050 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 SHROOM3Q8TF72 1996 aa12.44□□□□□ -0.42
CBWD3-208ENST00000612050 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 TSPAN11A1L157 253 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 CFAP69A5D8W1 941 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 APOL1O14791 398 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 WNT9AO14904 365 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 PPP1R12AO14974 1030 aaPredicted RBP12.43□□□□□ -0.42
CBWD3-208ENST00000612050 AREL1O15033 823 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 MFSD11O43934 449 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 MMP20O60882 483 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 CPP00450 1065 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 ELFN1P0C7U0 828 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 TIMP2P16035 220 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 CETN2P41208 172 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 EPHB1P54762 984 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 CLDN2P57739 230 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 GALNT2Q10471 571 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 PDE1CQ14123 709 aaPredicted RBP12.43□□□□□ -0.42
CBWD3-208ENST00000612050 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 TFDP2Q14188 446 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 LRRC14Q15048 493 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 LRRC73Q5JTD7 316 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 NCBP2-AS2Q69YL0 99 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 GCNT7Q6ZNI0 430 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 USP45Q70EL2 814 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 GATAD2AQ86YP4 633 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 RFX6Q8HWS3 928 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 GALNT15Q8N3T1 639 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 OR13H1Q8NG92 308 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 SAP25Q8TEE9 199 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 CNDP2Q96KP4 475 aaKnown RBP12.43□□□□□ -0.42
CBWD3-208ENST00000612050 MGME1Q9BQP7 344 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 PCDH12Q9NPG4 1184 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 ETNK2Q9NVF9 386 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 DNAJC28Q9NX36 388 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 CA5BQ9Y2D0 317 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
CBWD3-208ENST00000612050 A0A0A6YYK5 440 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-208ENST00000612050 RNF103O00237 685 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
CBWD3-208ENST00000612050 MATN3O15232 486 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 PSTPIP1O43586 416 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 CD48P09326 243 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 TNNT3P45378 269 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-208ENST00000612050 BLKP51451 505 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 TAS2R40P59535 323 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 DAB2P98082 770 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 ATP13A4Q4VNC1 1196 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 CCDC157Q569K6 752 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 ARMC12Q5T9G4 340 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 KIAA1328Q86T90 577 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms