RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 BRSK1Q8TDC3 778 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 PRR11Q96HE9 360 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-206ENST00000609853 GPR78Q96P69 363 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 CLSTN3Q9BQT9 956 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 EBF4Q9BQW3 602 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 PNPOQ9NVS9 261 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 ARMCX1Q9P291 453 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 STK39Q9UEW8 545 aa12.04□□□□□ -0.48
USP6NL-206ENST00000609853 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 A0A1B0GVM2 712 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 E2F8A0AVK6 867 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TCAF2A6NFQ2 919 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 B2RBV5 119 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 H3BNC9 293 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 COCHO43405 550 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 LDB2O43679 373 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 NPHS1O60500 1241 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 NDST3O95803 873 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RBP1P09455 135 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 HOXD9P28356 352 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 PRDX6P30041 224 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 SLC6A4P31645 630 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RPL14P50914 215 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RAP1GDS1P52306 607 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 OXCT1P55809 520 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TAS2R39P59534 338 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ZNF177Q13360 481 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TAF12Q16514 161 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ADGRF1Q5T601 910 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 MRNIPQ6NTE8 343 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RINLQ6ZS11 566 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 PIWIL4Q7Z3Z4 852 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CIR1Q86X95 450 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TREML1Q86YW5 311 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 HERC6Q8IVU3 1022 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CEP97Q8IW35 865 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ENDOVQ8N8Q3 282 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 GPATCH11Q8N954 259 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 KCTD4Q8WVF5 259 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CMTM5Q96DZ9 223 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TMEM169Q96HH4 297 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 OMDQ99983 421 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 HERC2P3Q9BVR0 1158 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RNF208Q9H0X6 261 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 DCLRE1BQ9H816 532 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 EBF2Q9HAK2 575 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RNPEPL1Q9HAU8 725 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 MRGBPQ9NV56 204 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CPSF2Q9P2I0 782 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 UBA2Q9UBT2 640 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TBC1D30Q9Y2I9 924 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ZFP37Q9Y6Q3 630 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 A8MUI8 341 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TK2O00142 265 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 SLC22A2O15244 555 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 HDAC3O15379 428 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 STC2O76061 302 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 PENKP01210 267 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ENO1P06733 434 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 SBK3P0C264 359 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CCL5P13501 91 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ATP5F1P24539 256 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ARRB2P32121 409 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 GRIA4P48058 902 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CCNG1P51959 295 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TLE2Q04725 743 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 RAB33AQ14088 237 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 IL31Q6EBC2 164 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 NAPRTQ6XQN6 538 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 TDRD5Q8NAT2 981 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 OR6P1Q8NGX9 317 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 NUDCD1Q96RS6 583 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 CINPQ9BW66 212 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 VN1R3Q9BXE9 311 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 COG4Q9H9E3 785 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 NCKIPSDQ9NZQ3 722 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 XPR1Q9UBH6 696 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 STOML2Q9UJZ1 356 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 VWA7Q9Y334 891 aa12.03□□□□□ -0.48
USP6NL-206ENST00000609853 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
USP6NL-206ENST00000609853 ANAPC1Q9H1A4 1944 aa12.02□□□□□ -0.48
USP6NL-206ENST00000609853 PRR5-ARHGAP8B1AHC4 643 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 F8W8V4 182 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 MATN2O00339 956 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 EFCAB14O75071 495 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 RPP40O75818 363 aaKnown RBP12.02□□□□□ -0.49
USP6NL-206ENST00000609853 UPP2O95045 317 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 GJB5O95377 273 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 SEC24AO95486 1093 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 CRTAMO95727 393 aa12.02□□□□□ -0.49
USP6NL-206ENST00000609853 GLP2RO95838 553 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms