RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 IGLV5-39A0A0G2JS06 123 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 HSPB2A8KAH6 182 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SNAP23O00161 211 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 ZBED4O75132 1171 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SEC31AO94979 1220 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 TFPIP10646 304 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SRD5A1P18405 259 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 ARL3P36405 182 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 TMEM115Q12893 351 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 LPIN1Q14693 890 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 HSPB2Q16082 182 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 CCNG2Q16589 344 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 WASHC2DQ5SRD0 308 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SNX30Q5VWJ9 437 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 LRRC8EQ6NSJ5 796 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 MZT2BQ6NZ67 158 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 PXKQ7Z7A4 578 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 TICAM2Q86XR7 235 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 TDRPQ86YL5 185 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 DENND6AQ8IWF6 608 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 DHX40Q8IX18 779 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 RBFAQ8N0V3 343 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 NRACQ8N912 160 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 GJC3Q8NFK1 279 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 GABPB2Q8TAK5 448 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SLC35F5Q8WV83 523 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 INPP5DQ92835 1189 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SMARCE1Q969G3 411 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SLC25A28Q96A46 364 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 NLRP4Q96MN2 994 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 BARD1Q99728 777 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 GLIS2Q9BZE0 524 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 NPFFR1Q9GZQ6 430 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 ISCUQ9H1K1 167 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 PRKRIP1Q9H875 184 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SIRT3Q9NTG7 399 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 TBC1D22BQ9NU19 505 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 ANKRD10Q9NXR5 420 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 NCKIPSDQ9NZQ3 722 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 NDRG3Q9UGV2 375 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 LIMA1Q9UHB6 759 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 SCINQ9Y6U3 715 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 CAPN7Q9Y6W3 813 aa4.48□□□□□ -1.69
SMCHD1-213ENST00000609587 EIF3CLB5ME19 914 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 KLRF2D3W0D1 207 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 RNASEH2AO75792 299 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 SCGB1D1O95968 90 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 MT-CYBP00156 380 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 TFP02787 698 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 TBXAS1P24557 533 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 NFKBIAP25963 317 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 DCTDP32321 178 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 RASSF2P50749 326 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 NAP1L1P55209 391 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 HDAC4P56524 1084 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 SELENOVP59797 346 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 ARF3P61204 181 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 OLR1P78380 273 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 ARF1P84077 181 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 MAMLD1Q13495 774 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 EIF4A2Q14240 407 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 DUSP6Q16828 381 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 PRTGQ2VWP7 1150 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 SLC45A4Q5BKX6 768 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 PRAMEF19Q5SWL8 479 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 NEK10Q6ZWH5 1172 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 PALB2Q86YC2 1186 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 ADSSL1Q8N142 457 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 PDILTQ8N807 584 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 INTS12Q96CB8 462 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 VCPIP1Q96JH7 1222 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 MXRA8Q9BRK3 442 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 ZBTB40Q9NUA8 1239 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 POT1Q9NUX5 634 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 INTS6Q9UL03 887 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 MKLN1Q9UL63 735 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 KCNE2Q9Y6J6 123 aa4.47□□□□□ -1.69
SMCHD1-213ENST00000609587 NPIPB11E5RHQ5 1161 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 H0YGN5 161 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 IFNL4K9M1U5 179 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 TAF4O00268 1085 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 CHL1O00533 1208 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 LIASO43766 372 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 TIPRLO75663 272 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 MTA2O94776 668 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 FGF2P09038 288 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ACADMP11310 421 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 LAMP2P13473 410 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ARSBP15848 533 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 CXCR3P49682 368 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 FAM27E3Q08E93 113 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 GOLGA8DPQ0D2H9 430 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 GRIK3Q13003 919 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ITGADQ13349 1161 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ARHGEF6Q15052 776 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 DPCR1Q3MIW9 517 aa4.46□□□□□ -1.7
SMCHD1-213ENST00000609587 ESCO2Q56NI9 601 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms