RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 AP3B1O00203 1094 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 TRAFD1O14545 582 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-214ENST00000608108 RNF40O75150 1001 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 BANF1O75531 89 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 LEFTY1O75610 366 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 NDST3O95803 873 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 EPOP01588 193 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 FGF1P05230 155 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 UGT2B4P06133 528 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 PDHA1P08559 390 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 ATXN1LP0C7T5 689 aaKnown RBP11.23□□□□□ -0.61
CTCFL-214ENST00000608108 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-214ENST00000608108 HLA-DPA1P20036 260 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 WASP42768 502 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-214ENST00000608108 DHX9Q08211 1270 aaKnown RBP11.23□□□□□ -0.61
CTCFL-214ENST00000608108 BBS9Q3SYG4 887 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 FBXO43Q4G163 708 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 SIRPB2Q5JXA9 342 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 ARMC12Q5T9G4 340 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 FBXO38Q6PIJ6 1188 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 TRMT11Q7Z4G4 463 aaKnown RBP11.23□□□□□ -0.61
CTCFL-214ENST00000608108 TMC3Q7Z5M5 1100 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 ZBED8Q8IZ13 594 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 STK40Q8N2I9 435 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 LPCAT1Q8NF37 534 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 OR8D1Q8WZ84 308 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 TRIB3Q96RU7 358 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 ADGRE3Q9BY15 652 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 PHACTR1Q9C0D0 580 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 SAYSD1Q9NPB0 183 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 SUN2Q9UH99 717 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 IL36AQ9UHA7 158 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 MUTYHQ9UIF7 546 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
CTCFL-214ENST00000608108 KRBA1A5PL33 1030 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 E7ESA3 106 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 EIF3HO15372 352 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 HTRA2O43464 458 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 FZD6O60353 706 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 PGLSO95336 258 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 PRLP01236 227 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 CTSLP07711 333 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 H2AFXP16104 143 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 MGAT1P26572 445 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 NTSR1P30989 418 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 MRPS21P82921 87 aaKnown RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 SLMAPQ14BN4 828 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 HP1BP3Q5SSJ5 553 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 CFAP58Q5T655 872 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 DENND5AQ6IQ26 1287 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 SDE2Q6IQ49 451 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 GDPD4Q6W3E5 623 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 SIX5Q8N196 739 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 IL17RCQ8NAC3 791 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 RPLP0P6Q8NHW5 317 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 CAVIN3Q969G5 261 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 RMDN1Q96DB5 314 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 ERLEC1Q96DZ1 483 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 SHDQ96IW2 340 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 LRIG1Q96JA1 1093 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 ZNF641Q96N77 438 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 GABRG3Q99928 467 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 OSBPL1AQ9BXW6 950 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 SUV39H2Q9H5I1 410 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 ARNT2Q9HBZ2 717 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 PRSS16Q9NQE7 514 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 BFARQ9NZS9 450 aa11.22□□□□□ -0.61
CTCFL-214ENST00000608108 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
CTCFL-214ENST00000608108 SDR42E2A6NKP2 422 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 ALOX15BO15296 676 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 SYNCRIPO60506 623 aaKnown RBP11.21□□□□□ -0.61
CTCFL-214ENST00000608108 ADAM23O75077 832 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 KLF8O95600 359 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-214ENST00000608108 CPP00450 1065 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 PRNPP04156 253 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 TPH1P17752 444 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 GRIA4P48058 902 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 EPHB1P54762 984 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 CRADDP78560 199 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 STARD3Q14849 445 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 POU6F1Q14863 301 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 ARSIQ5FYB1 569 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 CERCAMQ5T4B2 595 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 DENND2CQ68D51 928 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 CASC4Q6P4E1 433 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 DSG4Q86SJ6 1040 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 ANKMY2Q8IV38 441 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 MPP5Q8N3R9 675 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 TXNDC5Q8NBS9 432 aaKnown RBP11.21□□□□□ -0.61
CTCFL-214ENST00000608108 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
CTCFL-214ENST00000608108 ECHDC3Q96DC8 303 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 KLHL32Q96NJ5 620 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 WDR83Q9BRX9 315 aaKnown RBP11.21□□□□□ -0.61
CTCFL-214ENST00000608108 IL22Q9GZX6 179 aa11.21□□□□□ -0.61
CTCFL-214ENST00000608108 CD320Q9NPF0 282 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms